Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Colletotrichum_20falcatum_20[genbank_20GCA_5F001484525.1_202016-01-
04] 4,358 sequences; 48,186,431 total letters
Query= NC_027923.1
Length=132831
Score E
Sequences producing significant alignments: (Bits) Value
seq3878 87.8 2e-12
seq245 84.2 2e-11
>seq3878
Length=33396
Score = 87.8 bits (96), Expect = 2e-12
Identities = 140/201 (70%), Gaps = 0/201 (0%)
Strand=Plus/Minus
Query 27051 GTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCGAGCTGTTTACCG 27110
|| || || || || || ||||| ||||||| | |||| |||| || || || || ||
Sbjct 29558 GTCGACTCCTTCTGGATGTTGTAATCGCTCAGGGTGCGACCGTCCTCCAGTTGCTTTCCA 29499
Query 27111 GCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCGATCTTGTTTTTC 27170
||| |||| || ||||| || || || || | |||||| || || ||| ||| ||
Sbjct 29498 GCGAAAATCAGGCGCTGCTGGTCAGGGGGGATACCCTCCTTGTCTTGGATTTTGGACTTG 29439
Query 27171 AGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTGCCCGTCAGAGTT 27230
| | | || | |||||| | | ||||| || | || || | || || |||| ||
Sbjct 29438 ACGTTGTCGATAGTGTCAGAAGACTCAACCTCCAACGTAATCGTCTTTCCGGTCAAGGTC 29379
Query 27231 TTCACAAAGATTTGCATAGCT 27251
|| ||||||||||||||| ||
Sbjct 29378 TTGACAAAGATTTGCATACCT 29358
>seq245
Length=98725
Score = 84.2 bits (92), Expect = 2e-11
Identities = 152/222 (68%), Gaps = 3/222 (1%)
Strand=Plus/Minus
Query 130759 GATTTGAAAATCACCAGCCAGGACGCGTCTAACGTAAATGTTGCTCGTGAACGGTTCAAA 130818
|| ||| || || ||||| ||||| || | |||||||||| ||| | ||||| ||
Sbjct 90695 GACTTGGAACTCGCCAGCAAGGACACGACGCTGGTAAATGTTGGAGGTGTAAGGTTCGAA 90636
Query 130819 GGATTCGTTGTTGCCGAATATTTGTGCTGTAGTTGCGGTGGGCATGTATGCCACTAATAG 130878
| | |||||||| || || || || | || | || || |||||| || || | ||
Sbjct 90635 GCACTCGTTGTTACCCAAGATCTGAGAGGTGCTGGCAGTCGGCATGGGCGCGACGAGCAG 90576
Query 130879 AGAATTACGAAGACCGTGCGTCGTGATTTTTCGCTTCAATTCATCCCAATCCCATAGAGA 130938
||| || || | ||||||| | |||| | ||||| |||||| ||||| |||
Sbjct 90575 AGAGTTGCGGACACCGTGCTGCTTGATCTGCTCCTTCAGAGAATCCCAGTCCCAGAGATC 90516
Query 130939 GGTAGGTTTGACATTGTTCCACATATCAAATTGTAGTATGCC 130980
| ||||||||| |||||||| || | || || |||||
Sbjct 90515 CGAGGGTTTGACA---TTCCACATGTCGTACTGGAGGATGCC 90477
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 424911830406096
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |