Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Colletotrichum_20falcatum_20[genbank_20GCA_5F001484525.1_202016-01-
04] 4,358 sequences; 48,186,431 total letters
Query= NC_027925.1
Length=496396
Score E
Sequences producing significant alignments: (Bits) Value
seq3337 120 1e-21
seq245 84.2 7e-11
>seq3337
Length=46210
Score = 120 bits (132), Expect = 1e-21
Identities = 127/166 (77%), Gaps = 1/166 (1%)
Strand=Plus/Minus
Query 443699 CTTCGTCGAGCGACTAGTCGCTTTTGCTGTGGTCGAAGGACTGTTGTTTAGCGGCAGCTT 443758
||||| | |||| || || || ||||||| ||||| || | || ||||| || || |
Sbjct 4546 CTTCGCCCAGCGCCTGGTTGCCTTTGCTGCCGTCGAGGGCATCTTCTTTAGTGGT-GCCT 4488
Query 443759 TAGCCTCCATCTTCTGGTTGAAAAAGCGTGGACTTATGCACGGTCTGACCTTTAGTAACG 443818
| || |||||||||||| | || |||||||| || |||| ||||||||||| ||||
Sbjct 4487 TCGCATCCATCTTCTGGCTCAAGAAGCGTGGTCTCATGCCGGGTCTGACCTTCTCCAACG 4428
Query 443819 AACTGATCAGTCGGGACGAGGGTTTGCATTGCGACTTCGCCTGTCT 443864
| || ||| ||| ||||||||| |||| |||||||||||||||
Sbjct 4427 AGCTCATCTCTCGTGACGAGGGTCTGCACACCGACTTCGCCTGTCT 4382
>seq245
Length=98725
Score = 84.2 bits (92), Expect = 7e-11
Identities = 79/101 (78%), Gaps = 0/101 (0%)
Strand=Plus/Plus
Query 254981 CCAATGATCCGTGTGTTCAACAACGTGGCTCGCTACGTCGATCAAGGGGGCGGCAAACGC 255040
|| ||| ||||||| ||||||||| || ||||||||||| || || || ||| |||
Sbjct 89604 CCCATGCTCCGTGTCTTCAACAACACTGCCCGCTACGTCGACCAGGGCGGAAACAAGCGC 89663
Query 255041 CCAGGAGCGTTCACCATCTACCTGGAGCCGTGGCACGCCGA 255081
|| || || || |||||||||| ||||| |||||||| ||
Sbjct 89664 CCCGGTGCTTTTGCCATCTACCTCGAGCCTTGGCACGCTGA 89704
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1588247312281310
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |