Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Colletotrichum_20falcatum_20[genbank_20GCA_5F001484525.1_202016-01-
04] 4,358 sequences; 48,186,431 total letters
Query= NC_028092.1
Length=193301
Score E
Sequences producing significant alignments: (Bits) Value
seq245 228 1e-54
seq3337 143 3e-29
>seq245
Length=98725
Score = 228 bits (252), Expect = 1e-54
Identities = 1140/1801 (63%), Gaps = 45/1801 (2%)
Strand=Plus/Minus
Query 117837 CGGAGGTAGTACATCCCCGTCTTGAGCCCCTGCTTCCAGGCATACATATGCATTGAGGAC 117896
|| ||||||||||| |||||||| || || |||||||| || | ||||| ||
Sbjct 91006 CGCAGGTAGTACATGCCCGTCTTCAGTCCGAGCTTCCAGCCAGCGAAGTGCATGCTGGTG 90947
Query 117897 AACTTGGAGAGGGTTGGACTTTCCATGAAGAGGTTCATACTTTGGGATTGATCGATGAAG 117956
| |||| | || || || |||| || ||| | || || || |||||||||
Sbjct 90946 ATCTTGCCCATAGTCGGGTCTTTCATGTGGATGTTGAGCGACTGCGACTGGTCGATGAAG 90887
Query 117957 CGTCCCCGATCCGCCGCCATATCAATCACATCCTTCATCTTG---ATTTCCCACACAGTC 118013
|| || || || ||||| | |||| | | || | |||||||| ||||||
Sbjct 90886 GCGCCACGGTCGGCAGCCATTTG---CACAACGGTGCGCTGGGAGATTTCCCAAACAGTC 90830
Query 118014 CTGTAGAGGTTCTTAATATCATCTGGGATATCCACGATATTTTGGATGGATCCACCCGCC 118073
|||| || ||| | || || || | ||| || || || || ||| |
Sbjct 90829 TTGTACAGCGCCTTGACCTCGGTAGGAATGTTGGGGATGTTCTGAATAGA---ACCGTTC 90773
Query 118074 TTGACCATGA---GATCCTTCATATCCTTTGACCAGAGACCAATCTTTTTGAGATCCTCC 118130
| | | |||| | | ||||||| | | ||||| | || || | ||| |||| |
Sbjct 90772 TCGGCAATGATGCGGTTCTTCATAGCGTCAGACCACAAGCCCATGTCGACGAGGTCCTTC 90713
Query 118131 ACGAGATGCTTATTGACAACAACAAACTCACCCGCGAGGGTGCGTCTCAGATAGATATTG 118190
| ||| ||||| || ||||| || || ||| || | | | || || |||
Sbjct 90712 AAGAGCCAAGGGTTGACGACTTGGAACTCGCCAGCAAGGACACGACGCTGGTAAATGTTG 90653
Query 118191 GTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGAGGCTGTGGGC 118250
| ||||| || || |||||||| |||||||||||||| || | ||| ||| || |||
Sbjct 90652 GAGGTGTAAGGTTCGAAGCACTCGTTGTTACCCAAGATCTGAGAGGTGCTGGCAGTCGGC 90593
Query 118251 ATGGGTGCCATGAGAAGGCTGTTACGGAGACCCTTTTCCCTAATGCGTTCCTTGAGAGCG 118310
||||| || | ||| || ||| |||| ||| | | | | || | ||||| ||||
Sbjct 90592 ATGGGCGCGACGAGCAGAGAGTTGCGGACACCGTGCTGCTTGATCTGCTCCTTCAGAGAA 90533
Query 118311 TCCCAGTCGTAGTTGAGCTTTGTCTCCCCCTGCCACATATCAAACTGGAGGATACCTTGG 118370
|||||||| || | | | | | |||||| || |||||||||| || ||
Sbjct 90532 TCCCAGTCCCAGAGATCCGAGGGTTTGACATTCCACATGTCGTACTGGAGGATGCCCTGA 90473
Query 118371 GACGCTGGCGATCCCTCAAATGTCTCATATGGGCCCTCAACCTCCGCCAATTCGGAGCTC 118430
|| | || || |||||| | |||| ||| |||||||| ||| ||||| | || |
Sbjct 90472 GAAACAGGGGAACCCTCATACGTCTGATAGGGGCCCTCCTCCTTGGCCAACT--GAACCG 90415
Query 118431 GCCTCG--AGGGCTGCGTGATACATTGTTTCAAAAATGCGAGCATTCATTGCCTTGGCCT 118488
| | | ||||| ||||| || ||||| || || || || | | || |
Sbjct 90414 ACATGGTAAGGGCAGCGTGGTAGATTGTCTCGAAGATCTTCTTGTTGAGGTCACGAGCTT 90355
Query 118489 CGTCGGAATCAAACGCGAGTCGGCACAAAATAAATACATCCGCGAGACCTTGGACACCGA 118548
|| ||| || || | | ||| | || |||| || ||||| || |||||||
Sbjct 90354 CGGGGGACTCGAAGGGCATGCGGAGGGCCAAGAAGGCATCGGCAAGACCCTGAACACCGA 90295
Query 118549 GGCCAATTGGGCGATGTCTCATATTAGACTTCCGAGCGGTCTCCACGGGATAAAAATTCC 118608
| ||||| ||||| || | ||| || || ||||| || || || || ||
Sbjct 90294 GACCAATGGGGCGGTGGCGCATGTTGCTGTTGCGAGCCTCCTGGACCGGGTAGTGGTTGA 90235
Query 118609 TATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATGAAGCTTTTCGT 118668
|||||| | || || || || ||| |||| |||| || |||||||| | |
Sbjct 90234 CATCGATGATTCTGTTGAGGTTGCGAACGACGACCTGGGTGACCTCGTGAAGCTTCTGGA 90175
Query 118669 AATCA-AAACTGCGAGTCTCTTCATTGACAT---ACTTAGGAAGGGCGATTGACGCCAGA 118724
| || |||| | ||| | | | || | | || || || | || |||||
Sbjct 90174 AGTCGTAAACACC----CTCGTTGTAGTCAACGAAGGTGGGCAGCGCAAGCGAGGCCAGG 90119
Query 118725 TTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTGCACAAGTTTGAA 118784
|| ||||| | | |||||| | | |||||| || || || ||||| | ||| ||
Sbjct 90118 TTGCACACTGCGACCTCATCAGGAGCGCAGTACTCAATGATCTCAGTGCATAGGTTGGAG 90059
Query 118785 CTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCATCCTTGTAAAGC 118844
| ||||| |||| |||||| || || ||| ||| ||||||||||| |||
Sbjct 90058 TTACGGATGGTACCCAGGTTCTTCTGGTTGCTCTTGCGGTTGGCAGCATCCTTGTAGAGC 89999
Query 118845 ATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCAGACATCGGCAGCT 118904
|| | || | || ||||| ||||| | || ||| || || | ||||| || |
Sbjct 89998 ATAAAGGGGTTACCAGTCTCGGTTTGAGCCTCGAGGATGGCATACCAGA-----GCTTTT 89944
Query 118905 GGCACAGTGGCGT-TGGC-----TCGCCCCTCTTCCTCGTACTTTGTGTAGAGGGCTTCA 118958
|| | | | || | || | |||| ||| | |||||||| ||| ||||| ||
Sbjct 89943 GGGCCTTTAGGGTCTTGCGACCTTTGCCCATCTGC-TCGTACTTCTCGTACAGGGCCTCG 89885
Query 118959 AACTCTTCACCCACGGCCTCTGAGAGCCCTGGTGCCTTATCTGGGCAGAAGAGAGACCAT 119018
|| || || || | || | ||| || || || | ||||| | ||||| |||
Sbjct 89884 AATTCCTCGCCGTAGCAGTCGGCGAGACCAGGGCACTCGTTGGGGCACATGAGAGTCCAG 89825
Query 119019 TGACCACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGATCCAGAGCGCCGAGAAG-AG 119077
| || || ||| || | |||||||||||| || ||||||||||| || ||||| ||
Sbjct 89824 TCGCCGTTCTTCTCCACTCTCTTCATGAAGAGATCGGGGATCCAGAGGGC-GAGAAATAG 89766
Query 119078 ATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAAAGTCCATGAT 119137
|| ||| ||| | || || | ||| || || |||| ||||| ||||| | |
Sbjct 89765 GTCACGAGCGCGGACCTCCTCCTTCCCATGGTTCTTGCGCAGATCCAAGAAGTCAAATAC 89706
Query 119138 ATCCGCGTGCCACGGTTCCAGGTACACCGCGATTGACCCCTTACGACGA---CCAGCCTG 119194
||| |||||||| || || ||||| | || | | || || || ||||
Sbjct 89705 ATCAGCGTGCCAAGGCTCGAGGTAGATGGCAAAAGCACCGGGGCGCTTGTTTCCGCCCTG 89646
Query 119195 GTTTACATACCTCGCAGTGGCGTTAAATACACGAAGCATTGGAATGATACCATCGGATTG 119254
|| || || | |||||| ||| || ||||| ||||| |||| || || | ||
Sbjct 89645 GTCGACGTAGCGGGCAGTGTTGTTGAAGACACGGAGCATGGGAACGACGCCGTTAGAGGT 89586
Query 119255 GCCATTTGTCCCCCGAATACGAGACTTATTGGCTCTGACATCGTGGATGTGCATACCAAT 119314
||| || || || ||| ||| | || | || ||||| || | ||||||
Sbjct 89585 GCCGTTGGTGCCAGCAATGTAAGAGCCGGTAGCGCGGATGCGGTGGACGTTGAGACCAAT 89526
Query 119315 ACCCCCTGCCCACTTTGAGATTTGCGCGCACTCCGTGAGACTGCCGTAGATCCCATCGAT 119374
|| || ||| ||| ||||| || || | |||| || ||||||| || |||||
Sbjct 89525 GCCACCAGCCATCTTGGAGATCATAGCACAGGTCTTGAGGGTGTCGTAGATACCCTCGAT 89466
Query 119375 CGAGTCACCCTTATTTGCGATGAGGAAGCAGCTCGACATTTGAGGCCTGGGTGTACCAGC 119434
||||| |||| | ||| ||||| || |||| || | | ||| ||||| ||
Sbjct 89465 AGAGTCCTCCTTCATATCGACAAGGAAACAAGAGGACAGCTGCGCCTGGGGGGTACCGGC 89406
Query 119435 GTTGAAGAGAGTTGGTGTCGCGTGGATGAACATACCTTG--GGACATCTTGTCGTAGGTC 119492
||||||||| || || | |||||| ||| | | |||| |||||| || |||||||
Sbjct 89405 GTTGAAGAGTGTGGGAGAGGCGTGGGTGA--AGAACTTGCTCGACATCAGGTTGTAGGTC 89348
Query 119493 TCCAAGACGGCGGGAATGTCTTCCCCGTGAATACCGATCGAGACCCGCATAAACATGTAT 119552
|| | ||| || || || || || |||| | || ||||| | |||||
Sbjct 89347 TCGATAACGCGCTCAACGTTGTCGCCCCAGATTCCGACAGCAACACGCATGATCATGTGC 89288
Query 119553 TGGGGTGTTTCCATCAGGATACCATCGAGCCTCTGGAGGTAACTCTTCTCCAAGGTCTTG 119612
|||||| | || | | || || ||| || |||||||| ||||||||||||||
Sbjct 89287 TGGGGTCTCTCGGCAATCTTGCCGTCAAGCTTCAGGAGGTAAGATCTCTCCAAGGTCTTG 89228
Query 119613 A 119613
|
Sbjct 89227 A 89227
>seq3337
Length=46210
Score = 143 bits (158), Expect = 3e-29
Identities = 348/522 (67%), Gaps = 20/522 (4%)
Strand=Plus/Plus
Query 129728 TAGTCCCCAACCCGCTTCTCGAAGAAGTTTGTCTTCCCGTCCAAGCTGATATTCTCCATA 129787
||||| |||| ||||||||||||||||| ||||| ||| ||| | ||| ||||||||
Sbjct 4100 TAGTCGGCAACACGCTTCTCGAAGAAGTTGGTCTTGCCGCCCAGGGAGATGTTCTCCATG 4159
Query 129788 AAATCAAATGGGTTCTTTGAGTTCCAAA----TTGCTGGCACTCCAATCTGTTTGAGGAG 129843
|| || || ||||| || || | | || | || ||| | |||||
Sbjct 4160 AAGTCGAAGGGGTTGGAAGACTTGTAGACCTTTTCGTTGC----CAAGCGCAACAAGGAG 4215
Query 129844 ACGATCCGAGACGTACTCAATGTACTCAGACATCTTCTCGGAGTTCATACCGATGAGGTT 129903
||| || | ||| |||||||||||| |||| | ||||||||| |||| |||
Sbjct 4216 ACGGTCGGCAACGAACTCAATGTACTGCTTCATCAGGTTGGAGTTCATGCCGAGCAGGGC 4275
Query 129904 ACATGGGAGCGCGTCCAAGATGAACCCCTTCTCAATGTCCACAGCTTCCCGCACGATGGC 129963
|| || || || ||| | |||| ||| |||||| | ||||| || | |||| |
Sbjct 4276 GCAAGGAAGAGCCTCCGTCAGGAACTCCTGCTCAATCTTGACAGCATCGACAATGATGTC 4335
Query 129964 GTGAATGGTCTCCGTGCCAGGTC---TATTGCGCAAAGTCTTGAAGAGTTCCACGGCAAA 130020
| || || | ||| || | | ||| | | | ||||| || ||| ||
Sbjct 4336 CTCGATAACCTGCTTGCTGGGGCGGTTCTTGAGGTGGGAATACAAGAGA--CA-GGCGAA 4392
Query 130021 CTCCTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCAT 130080
|| ||| |||||||||||||| |||||||| || || |||||| |||||| |||||
Sbjct 4393 GTCGGTGTGCAGACCCTCGTCACGAGAGATGAGCTCGTTGGAGAAGGTCAGACCCGGCAT 4452
Query 130081 GAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTC 130140
|||||| |||||||| | |||||| || | || | ||| |||||||| |||||
Sbjct 4453 GAGACCACGCTTCTTGAGCCAGAAGATGGATGCGAAGGCACCACTAAAGAAGATGCCCTC 4512
Query 130141 CACACACGCGAACGCAAAGAGACGCTCAGCAAAGGAGCGGGACTTTGTATC---AAACCA 130197
|| || || |||| || |||| || ||||| |||||| ||| || |||
Sbjct 4513 GACGGCAGCAAAGGCAACCAGGCGCTGGGCGAAGGA---GGACTTCTCATCGCTAATCCA 4569
Query 130198 CTTCATCGCCCACTGCGCCTTTTTCTCGATACACGGGACGGT 130239
||| | ||||| | ||||| || || || ||||| ||
Sbjct 4570 CTTGAGGGCCCAGTCGGCCTTCTTGCGAATGCAAGGGACTGT 4611
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 618401510742480
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