Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Colletotrichum_20falcatum_20[genbank_20GCA_5F001484525.1_202016-01- 04] 4,358 sequences; 48,186,431 total letters Query= NC_028636.1 Length=135952 Score E Sequences producing significant alignments: (Bits) Value seq3878 98.7 9e-16 >seq3878 Length=33396 Score = 98.7 bits (108), Expect = 9e-16 Identities = 140/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 ||||| || ||||| || || ||||||| ||| | ||||| | || || || | || Sbjct 29362 ATGCAAATCTTTGTCAAGACCTTGACCGGAAAGACGATTACGTTGGAGGTTGAGTCTTCT 29421 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | || || | ||||| ||||| |||||||| || || || || || || || Sbjct 29422 GACACTATCGACAACGTCAAGTCCAAAATCCAAGACAAGGAGGGTATCCCCCCTGACCAG 29481 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 ||||| | || | ||| || || ||| |||| ||| || ||| | |||||||||| Sbjct 29482 CAGCGCCTGATTTTCGCTGGAAAGCAACTGGAGGACGGTCGCACCCTGAGCGATTACAAC 29541 Query 27168 ATTCAAAAGGAGTCGAC 27184 || || ||||||||||| Sbjct 29542 ATCCAGAAGGAGTCGAC 29558 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 434894707820160