Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Colletotrichum_20falcatum_20[genbank_20GCA_5F001484525.1_202016-01-
04] 4,358 sequences; 48,186,431 total letters
Query= NC_029132.1
Length=140122
Score E
Sequences producing significant alignments: (Bits) Value
seq855 107 2e-18
>seq855
Length=37984
Score = 107 bits (118), Expect = 2e-18
Identities = 205/294 (70%), Gaps = 6/294 (2%)
Strand=Plus/Plus
Query 6727 GACGTAGAATTG-GCAGAGGGTGTGGCACGGGGGGAGCGCCATCAGAGGGAGATCCTTCG 6785
||||||||| || ||| | ||||||| || || || |||||| |||||| ||
Sbjct 2356 GACGTAGAACTGCGCAAACA-TGTGGCATGGTGGCAGGGCCATCTTCTTTAGATCCGCCG 2414
Query 6786 GGTTCCACGCGCACATCACGATCCTTCTGTCATCAGGGTTCCGCTTCAAGGTGTCGATCA 6845
|||||||||||| | | ||| | | || | ||||||| ||| | ||| ||| |
Sbjct 2415 GGTTCCACGCGCTGAGGAGGATGCGGCGATCGTAAGGGTTCGTCTTGAGCTTGTGGATAA 2474
Query 6846 CGTACTGC-AGCTGGTCCGCTCCCTGTCCCGAATAGTCCG-CTTCGCTCCCCCGATACTC 6903
| | | || |||||||| | ||||| |||| ||||||| ||| || | || |||||
Sbjct 2475 CCT-CGGCAAGCTGGTCGACACCCTGACCCGTGTAGTCCGTCTTGGCGTCGACG-TACTC 2532
Query 6904 CGCCCCAAAGTGTCTCCACTGGAACCCGTAGACCGGGCCCAAGTCGCCCTCCTCCCGAGA 6963
|| |||||||||| ||| ||||| || ||||| ||||| | |||||| | || ||
Sbjct 2533 GGCGCCAAAGTGTCGCCATTGGAATCCATAGACTGGGCCGAGGTCGCCGACTTCTCGGTG 2592
Query 6964 TGGGAACCCCCGCTTGTCCAGAAAGTCTCGAGACCCGTGAGCGTCCCAGATCTT 7017
| || || ||||||| || || || || |||| ||||||| |||||
Sbjct 2593 CGAGAGGCCGACACTGTCCAGGAACTCACGTGAGCCGTTGCCGTCCCAAATCTT 2646
Score = 107 bits (118), Expect = 2e-18
Identities = 205/294 (70%), Gaps = 6/294 (2%)
Strand=Plus/Minus
Query 34328 AAGATCTGGGACGCTCACGGGTCTCGAGACTTTCTGGACAAGCGGGGGTTCCCATCTCGG 34387
||||| ||||||| |||| || || || || ||||||| || || | ||
Sbjct 2646 AAGATTTGGGACGGCAACGGCTCACGTGAGTTCCTGGACAGTGTCGGCCTCTCGCACCGA 2587
Query 34388 GAGGAGGGCGACTTGGGCCCGGTCTACGGGTTCCAGTGGAGACACTTTGGGGCGGAGTAT 34447
|| | |||||| | ||||| ||||| || ||||| ||| |||||||||| || |||||
Sbjct 2586 GAAGTCGGCGACCTCGGCCCAGTCTATGGATTCCAATGGCGACACTTTGGCGCCGAGTA- 2528
Query 34448 CGGGGGAGCGAAG-CGGACTATTCGGGACAGGGAGCGGACCAGCT-GCAGTACGTGATCG 34505
|| | || ||| ||||||| |||| ||||| | |||||||| || | | || |||
Sbjct 2527 CGTCGACGCCAAGACGGACTACACGGGTCAGGGTGTCGACCAGCTTGCCG-AGGTTATCC 2469
Query 34506 ACACCTTGAAGCGGAACCCTGATGACAGAAGGATCGTGATGTGCGCGTGGAACCCGAAGG 34565
||| | ||| ||||||| | || | | ||| | | |||||||||||||| ||
Sbjct 2468 ACAAGCTCAAGACGAACCCTTACGATCGCCGCATCCTCCTCAGCGCGTGGAACCCGGCGG 2409
Query 34566 ATCTCCCTCTGATGGCGCTCCCCCCGTGCCACACCCTCTGC-CAATTCTACGTC 34618
|||| |||||| || || || ||||||| | ||| || |||||||||
Sbjct 2408 ATCTAAAGAAGATGGCCCTGCCACCATGCCACA-TGTTTGCGCAGTTCTACGTC 2356
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 448237980905760
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |