Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Colletotrichum_20gloeosporioides_20[genbank_20GCA_5F002189585.1_2020 17-06-09] 1,564 sequences; 57,603,470 total letters Query= NC_000852.5 Length=330611 Score E Sequences producing significant alignments: (Bits) Value seq1201 105 1e-17 >seq1201 Length=295393 Score = 105 bits (116), Expect = 1e-17 Identities = 136/188 (72%), Gaps = 0/188 (0%) Strand=Plus/Minus Query 230452 GGCATGAACGCTGAACTTATGGGACAGTACATCGAATTCGTAGCCGACCGCATTTTTGTT 230511 ||||||||| | | || ||| || |||||||| ||||| || || || | || || Sbjct 156380 GGCATGAACTCCAACCTGATGAAGCAATACATCGAGTTCGTCGCTGATCGTCTGTTGGTC 156321 Query 230512 GCACTTGGTTACGAGAAAGTGTACAACTCTAAGAACCCCTTTGCATTTATGGAGCTCATT 230571 || || || |||| || || ||||| || |||||||| | || |||||| ||| Sbjct 156320 GCTCTCGGCAACGACAAGGTCTACAAATCGGCCAACCCCTTCGACTTCATGGAGAACATC 156261 Query 230572 TCGCTTCAAGGGAAGACCAACTTCTTCGAAAAGCGTGTCAGTGACTATCAGAGGCCTGGT 230631 || ||| || |||||||||||||| || ||||||||| ||||| |||| | | ||| Sbjct 156260 TCTCTTGGTGGCAAGACCAACTTCTTTGAGAAGCGTGTCGCCGACTACCAGAAGGCCGGT 156201 Query 230632 GTGATGAA 230639 || ||||| Sbjct 156200 GTCATGAA 156193 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1057802802529320