Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Colletotrichum_20gloeosporioides_20[genbank_20GCA_5F002189585.1_2020 17-06-09] 1,564 sequences; 57,603,470 total letters Query= NC_003102.1 Length=139342 Score E Sequences producing significant alignments: (Bits) Value seq211 356 2e-93 seq1201 178 1e-39 seq442 109 5e-19 seq1544 95.1 1e-14 seq428 95.1 1e-14 seq632 91.5 1e-13 seq643 87.8 2e-12 >seq211 Length=153984 Score = 356 bits (394), Expect = 2e-93 Identities = 651/947 (69%), Gaps = 5/947 (1%) Strand=Plus/Plus Query 23031 CAAGATTGCATACGGCCACCTCGTCTTTGGACGTGTACTCTACAATTTCGGTACATAGAT 23090 |||| ||||| ||||| |||||||| || || |||||| | ||||| || || || | Sbjct 108933 CAAG-TTGCAGACGGCGACCTCGTCAGGGGCCGAGTACTCAATGATTTCCGTGCAAAGGT 108991 Query 23091 TGCTACACTTTATCGTGCCCAAATTGCTCTGGTTGCTTTTTCGATTG-CACGAATCCTTG 23149 || | || ||||| | ||| |||||||||| || || ||| || || |||||| Sbjct 108992 TGGAGCTTCGAATGGTGCCGAGATTCTTCTGGTTGCTCTTGCGGTTGGCATGA-TCCTTG 109050 Query 23150 TAGAGCATGTACGGCGTGCCCGTCTCGACCTGCGACTCGATGATCGCTCGCCACATAGTC 23209 ||||||||| | || |||| ||||| ||| | ||||| || || ||| | || Sbjct 109051 TAGAGCATGAAAGGGTTGCCGGTCTCAGTCTGGGCCTCGAGAATGGCATACCAGAGCTTC 109110 Query 23210 TGAGCGTGAACACGTCGCACGTACCT-GCCTTCTTCCTCGTACTTTTGGTACAACGCGTC 23268 || || | | ||| || ||| |||||| ||||||||| | |||||| || || Sbjct 109111 TGGGCCTTCATG-GTCTTTCGACCCTTGCCTTCGCGCTCGTACTTCTCGTACAAGGCTTC 109169 Query 23269 AAATTCGGCACCGTAACAGTCGGCCAGGCCGGGCGATTGCATCGGACACATGAGACTCCA 23328 ||||| | || || |||||||| || || || | | | |||||||| || |||| Sbjct 109170 GAATTCCTCGCCATAGCAGTCGGCAAGACCCGGGCACTCGTTGGGACACATCAGTGTCCA 109229 Query 23329 CATTGAGTCATTTTCAACGCGTCTCATAAAAAGATCCGGTATCCATAGAGCGTAGAACAG 23388 || || || || || |||| || ||||| || ||||| || ||| ||| || Sbjct 109230 GTCACCGTTCTTCTCCACTCGCTTCATGAAGAGATCAGGGATCCAAAGGGCGAGGAAAAG 109289 Query 23389 TTCGCGGGCGCGCACCTCCTCTTTGCCGGTGTTCTTTTTCAAATCCAAAAAGTCCAACAC 23448 || ||||| || |||||||| |||||| |||||| | |||||||| || || || Sbjct 109290 GTCACGGGCACGGACCTCCTCCTTGCCGTGGTTCTTGCGGAGGTCCAAAAACTCGAAGAC 109349 Query 23449 GTCCGCATGCCACGGCTCGAGGTAAACGGCAAACGCGCCCGGTCTCTTATTGCCGCCCTG 23508 ||| |||||||| ||||||||||| | |||||| || || || | ||| ||||| ||||| Sbjct 109350 GTCGGCATGCCAGGGCTCGAGGTAGATGGCAAAGGCACCGGGGCGCTTGTTGCCACCCTG 109409 Query 23509 ATCGACGTAACGGGCCGTGTTGTTGTACACTCTTAGCATCGGCACGAGACCGTTGGACGC 23568 ||||| || ||||| ||||||||| | || | ||||| || | ||||||||| | Sbjct 109410 GTCGACATAGCGGGCGGTGTTGTTGAAGACGCGGAGCATAGGGGTAACACCGTTGGAGGT 109469 Query 23569 GCCGCCTACGCCCGCCACACTCGAACCTTTTGCTCGAACGTTGTGAACGTGGAAACCTAT 23628 ||| ||| || | || || | || || | | ||| || | | ||| || Sbjct 109470 GCCATTGGTGCCGGCGATGTAGGAGCCAGTGGCACGGATGCGGTGGACATTTAGACCAAT 109529 Query 23629 GCCTCCGCCCGATTTCGATATCATCGCGCATTGTTTCAGAGTGTCGTAGATGCCCTCGAT 23688 ||| ||| || ||| |||||||| ||||| ||||||||||||||||||||||| || Sbjct 109530 GCCGCCGGCCATTTTTGATATCATGGCGCAGGTCTTCAGAGTGTCGTAGATGCCCTCAAT 109589 Query 23689 GCTGTCCTCTTTGGTCGCGACCAAGAAACACGAAGACATTTGCGCTTTGGGCGTAGCGGC 23748 ||| || || | |||| | || || || |||| || || | ||| ||| |||| Sbjct 109590 AGAGTCTTCCTTCATGTCGACGAGAAAGCAGGACGACAGCTGTGCCTGGGGAGTACCGGC 109649 Query 23749 CGAGAACAGTGTCGGGCTGGCGTGCGTAAAGTATCCATTCGACATTAGATTGTACGTGTC 23808 ||||| ||| || ||||| || ||| | ||||||| | ||||| || || Sbjct 109650 GTTGAACAATGTGGGCGAAGCGTGGGTGAAGCACTTGCTCGACATCAAGTTGTATGTCTC 109709 Query 23809 GATGGCGGCATCAATGTCCTCTCCGTGTATACCGATGGCGACGCGCATCATCATGTATTG 23868 ||| || |||| || || || || || | ||| |||||||| ||||||| || Sbjct 109710 AATGACGCGCTCAACATCGTCGCCCCAGATGCCAACGGCAACGCGCATGATCATGTGCTG 109769 Query 23869 AGGTCTCTCGACCGTGACGCCGTTAATTTTGAACAGATATGAACGTTGCATCGTTTTAAA 23928 ||||||||| | | ||| | || |||| ||||| || | | || || ||||| Sbjct 109770 TGGTCTCTCGGCAATCTTGCCATCAAGCTTGAGAAGATAGGATCTCTCCAAGGTCTTAAA 109829 Query 23929 TCCAAAATAGTCATAGTTAAAGTCACGATCGTGCACTATGGCCGAAT 23975 || || || | ||||| ||||| || |||| || ||||| |||| Sbjct 109830 GCCGAAGTATTGGTAGTTGAAGTCGCGGTCGTAAACGATGGCAGAAT 109876 >seq1201 Length=295393 Score = 178 bits (196), Expect = 1e-39 Identities = 388/575 (67%), Gaps = 7/575 (1%) Strand=Plus/Minus Query 57570 ATTTGGAACATGTACAAAAAGGCAGAAGCATCGTTTTGGACCGTCGAAGAAGTAGACCTG 57629 |||||| | |||||||| ||||| || || || || ||||| | || || | || || Sbjct 157055 ATTTGGCAAATGTACAAGAAGGCCGAGGCCTCTTTCTGGACTGCTGAGGAGATTGATTTG 156996 Query 57630 TCTAAGGATCTGAGCGATTGGGATTCCC---TCAAAGAATCTGAGAGAAATTTTATTAAA 57686 || |||||||| ||| ||| | | |||| || ||||| | || || Sbjct 156995 TCCAAGGATCTCCACGACTGGAACAACAAGATCAACGATGATGAGAAGTACTTCATCTCT 156936 Query 57687 CACGTGTTGGCGTTTTTCGCCGCATCCGATGGTATTGTTAACGAGAATTTGGTCGAAAGA 57746 ||| | | || || |||||||| ||||| || || || || ||||| |||| || | Sbjct 156935 CACATTCTCGCCTTCTTCGCCGCTTCCGACGGCATCGTCAATGAGAACCTGGTTGAGCGT 156876 Query 57747 TTTTCACAAGAAGTGCAAGTGACGGAGGCGAGATGCTTTTACGGATTTCAAGTGGCCATT 57806 || || ||||| || || | |||||| | ||||| ||||| || || | || Sbjct 156875 TTCTCTGGCGAAGTCCAGGTCCCCGAGGCGCGCTGCTTCTACGGCTTCCAGATCATGATG 156816 Query 57807 GAAAACGTGCATTCAGAAATGTATTCGCTACTCATCGATACGTACGTGAAGGACAACGAC 57866 || ||| | || || || | || || || |||||||| || ||| | ||||| | | Sbjct 156815 GAGAACATTCACTCCGAGACTTACTCCCTTCTCATCGACACCTACATTAAGGAGCCTGCC 156756 Query 57867 GAGAA-ACGTAGACTGTTCAACGCGATCGAAACAATGCCCGCGATCGCCAAGAAGGCAGA 57925 || || || || |||||||| ||||| || || ||| ||| |||||||| || Sbjct 156755 CAGCGTACCTAT-CTCTTCAACGCCATCGACACCATCCCCTGCATCCGTAAGAAGGCTGA 156697 Query 57926 GTGGTCAATCAAATGGATAAAAAGCGCCACGGCCACGTTCGCCGAGAGGCTAATCGCGTT 57985 ||| | | ||||| | | | | | |||| |||||| || | || | || || Sbjct 156696 CTGGGCCTTGCGCTGGATCACGGACACAAAGTCCACCTTCGCCCAGCGCCTCGTTGCCTT 156637 Query 57986 CGCCGCCGTCGAAGGTATATTCTTTTCGGGCAGCTTT-GCGGCAATATTTTGGATGAAGA 58044 ||||||||||| || || ||||| || ||||| || | || || ||| | |||| Sbjct 156636 TGCCGCCGTCGAGGGCATCTTCTTCAGCGGT-GCTTTCGCCTCCATCTTCTGGCTCAAGA 156578 Query 58045 AACGCGGCCTGATGCCCGGCCTGACGTTTAGCAACGAGTTGATATCGCGCGACGAGGGTC 58104 | || || || |||||||| || || || ||||||| | || || || || ||||||| Sbjct 156577 AGCGTGGTCTCATGCCCGGTCTAACCTTCTCCAACGAGCTCATCTCCCGTGATGAGGGTC 156518 Query 58105 TCCATACTGATTTTGCGTGCCTAATGTACTCTCAC 58139 |||| || || ||||| ||||| ||||||||||| Sbjct 156517 TCCACACCGACTTTGCCTGCCTTCTGTACTCTCAC 156483 >seq442 Length=625744 Score = 109 bits (120), Expect = 5e-19 Identities = 152/213 (71%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| |||||||| ||||| ||||| ||||| ||||| ||| | || || || |||| Sbjct 417415 ATGCAGATTTTCGTGAAGACCCTGACCGGCAAGACGATTACCTTAGAGGTGGAGTCGTCA 417356 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| |||| | ||||| | || ||||||||| ||| | || ||||||||| Sbjct 417355 GACACAATCGACAACGTCAAGTCCAAGATCCAGGACAAGGAGGGCATCCCCCCCGACCAG 417296 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 |||||||| || || ||||| || ||| | || ||| || | ||| || ||| Sbjct 417295 CAGCGTCTTATCTTTGCTGGTAAGCAGCTTGAGGACGGCCGCACCCTCTCCGACTACAAC 417236 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTT 31405 ||||| || || ||||| || || |||| ||| Sbjct 417235 ATTCAGAAGGAGTCGACCCTCCACTTGGTGCTT 417203 Score = 104 bits (114), Expect = 2e-17 Identities = 153/217 (71%), Gaps = 0/217 (0%) Strand=Plus/Minus Query 31205 GTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCCGACAGTGTCGAA 31264 || |||||||| || ||||| || |||||| |||| || || | ||||| | |||| Sbjct 417631 GTCAAGACTCTCACTGGCAAGACCATCACCCTCGAGGTGGAGTCTAGCGACACTATCGAC 417572 Query 31265 ACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAGCAGCGTCTAATA 31324 | ||||| | || ||| ||||| ||| | || ||||||||||||||||| || Sbjct 417571 AACGTCAAGTCCAAGATCCAGGATAAGGAGGGCATTCCCCCCGACCAGCAGCGTCTCATC 417512 Query 31325 TTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAACATTCAAAAAGAA 31384 ||||||||||| ||| | || ||| | || | ||| || |||||||| || || Sbjct 417511 TTCGCTGGCAAGCAGCTCGAGGACGGTCGTACCCTCTCCGACTACAACATTCAGAAGGAG 417452 Query 31385 TCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421 || || ||||| |||| ||| | || | || |||| Sbjct 417451 TCTACCCTTCACTTGGTCCTTCGCCTTCGCGGAGGTA 417415 Score = 91.5 bits (100), Expect = 1e-13 Identities = 148/213 (69%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251 |||||| || ||||| ||||| || || ||||| || |||||| |||| || || | || Sbjct 417929 CATGCAGATCTTCGTCAAGACCCTCACTGGCAAGACCATCACCCTCGAGGTGGAGTCTTC 417870 Query 31252 CGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 ||| | |||| | || || | || ||| ||||| ||| | || |||||||| Sbjct 417869 CGATACCATCGACAATGTGAAGTCTAAGATCCAGGATAAGGAGGGCATCCCCCCCGACCA 417810 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371 ||| ||||| || ||||| ||||| ||| | || || || || ||||| || Sbjct 417809 GCAACGTCTTATTTTCGCCGGCAAGCAGCTTGAGGATGGCCGCACCTTGTCTGATTACAA 417750 Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404 ||| || || ||||| || ||||| |||| || Sbjct 417749 CATCCAGAAGGAATCTACCCTTCACTTGGTTCT 417717 >seq1544 Length=892 Score = 95.1 bits (104), Expect = 1e-14 Identities = 150/215 (70%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 31190 AACATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCG 31249 || |||||||| ||||| || || ||||| || || || ||||| |||| || || Sbjct 838 AAGATGCAAATATTCGTTAAAACCCTGACCGGAAAGACCATCACTCTCGAGGTCGAGAGT 779 Query 31250 TCCGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGAC 31309 || |||| |||| | ||||| | || |||||||||||| | || || ||| Sbjct 778 TCTGACACCATCGACAACGTCAAGGCTAAGATCCAGGACAAGGAAGGAATTCCCCCTGAC 719 Query 31310 CAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTAT 31369 ||||| ||||| || ||||| || |||||| | || ||| | ||| | || || Sbjct 718 CAGCAACGTCTGATCTTCGCCGGAAAACAGCTCGAGGACGGTCGTACTCTTGCTGACTAC 659 Query 31370 AACATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404 ||||| || || ||||| || |||||||| || || Sbjct 658 AACATCCAGAAGGAATCAACCCTTCATCTTGTCCT 624 >seq428 Length=571 Score = 95.1 bits (104), Expect = 1e-14 Identities = 158/223 (71%), Gaps = 4/223 (2%) Strand=Plus/Minus Query 31190 AACATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCG 31249 || ||||| |||||||| || || || || || ||||| |||||| |||| || || Sbjct 568 AAAATGCAGATTTTCGTGAAAACCCTAACCGGGAAAACCATCACCCTCGAGGTCGAGAGC 509 Query 31250 TCCGACAGTGTCGAAACGGTCAA-ACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGA 31308 ||||| |||| | ||||| || ||| | | |||| ||||| | || || || Sbjct 508 AGCGACACCATCGACAATGTCAAGACCAAGATTCAAG-ACAAAGAAGGTATCCCTCCGGA 450 Query 31309 CCAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATG-ACTATGAGCGATT 31367 ||||||||| | || |||||||| || ||| | ||||| | | | || || ||||| Sbjct 449 TCAGCAGCGTTTGATTTTCGCTGGTAAGCAGCTTGAAGA-TGGACGCACCTTGGCCGATT 391 Query 31368 ATAACATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACT 31410 | || || || || ||||| ||||||||||| || || || || Sbjct 390 ACAATATCCAGAAGGAATCTACTCTTCATCTTGTTCTCAGGCT 348 >seq632 Length=500 Score = 91.5 bits (100), Expect = 1e-13 Identities = 148/213 (69%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| || ||||| ||||| || || |||||||| ||||| | || ||||| || Sbjct 23 ATGCAGATCTTCGTCAAGACCCTCACGGGCAAAACAATCACTCTTGAGGTTGAGCCCAGT 82 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 || | | | |||| || ||| | || |||||| ||||| | || || ||||| Sbjct 83 GATACTATAGAAAATGTTAAAGCCAAGATTCAGGACAAAGAAGGAATTCCCCCTGACCAA 142 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 ||| | | || || ||||| |||||||||||||| | || || ||| || ||| Sbjct 143 CAGAGATTGATCTTTGCTGGTAAACAGTTGGAAGATGGCAGAACATTGTCCGACTACAAC 202 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTT 31405 || || || || || || |||||||| || ||| Sbjct 203 ATCCAGAAGGAGTCTACCCTTCATCTTGTCCTT 235 >seq643 Length=80414 Score = 87.8 bits (96), Expect = 2e-12 Identities = 116/161 (72%), Gaps = 0/161 (0%) Strand=Plus/Minus Query 31188 CAAACATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAAC 31247 ||| |||||| || ||||| ||||| || || || || || |||||| | || || || Sbjct 65465 CAATCATGCAGATCTTCGTCAAGACCCTCACGGGTAAGACTATCACCCTTGAGGTGGAGT 65406 Query 31248 CGTCCGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCG 31307 | ||||||| |||| | ||||| | || ||||||||| ||| | || |||| Sbjct 65405 CTTCCGACACCATCGACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGCATCCCCCCCG 65346 Query 31308 ACCAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGAC 31348 |||||||||| || || ||||| || || ||| | || ||| Sbjct 65345 ACCAGCAGCGCCTGATCTTCGCCGGAAAGCAGCTCGAGGAC 65305 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445757685266880