Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Colletotrichum_20gloeosporioides_20[genbank_20GCA_5F002189585.1_2020 17-06-09] 1,564 sequences; 57,603,470 total letters Query= NC_003391.1 Length=205719 Score E Sequences producing significant alignments: (Bits) Value seq211 156 6e-33 >seq211 Length=153984 Score = 156 bits (172), Expect = 6e-33 Identities = 433/659 (66%), Gaps = 14/659 (2%) Strand=Plus/Plus Query 66027 GGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATC 66086 |||||||||| | ||| || |||| | || |||||| ||||| ||||||||||| ||| Sbjct 109213 GGACACATCAGTGTCCAGTCACCGTTCTTCTCCACTCGCTTCATGAAGAGATCAGGGATC 109272 Query 66087 CAAAGAGCTATAAATAAATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGA 66146 ||||| || | || | || | || | ||||| || || ||||| || Sbjct 109273 CAAAGGGCGAGGAAAAGGTCACGGGCACGGACCTCCTCCTTGCCGTGGTTCTTGCGGAGG 109332 Query 66147 TCGAGGAACGCCATAATATCATAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGC 66206 || | ||| | | | || |||||| || || | ||| ||||| | | || || Sbjct 109333 TCCAAAAACTCGAAGACGTCGGCATGCCAGGGCTCGAGGTAGATGGCAAAGGCACCGGGG 109392 Query 66207 CGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGA 66266 || ||||| || ||||| || | || | |||||||| || | || | | ||| || Sbjct 109393 CGCTTGTTGCCACCCTGGTCGACATAGCGGGCGGTGTTGTTGAAGACGCGGAGCATAGGG 109452 Query 66267 ATAATACCATTGGATGTACCATTGGTCCCGGAGATATAGCTTCCACTTGCACGAATAT-- 66324 ||| ||| ||||| || |||||||| |||| ||| ||| ||| | ||||| || Sbjct 109453 GTAACACCGTTGGAGGTGCCATTGGTGCCGGCGATGTAGGAGCCAGTGGCACGGATGCGG 109512 Query 66325 TACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACG 66384 | ||| |||||| || || || |||||||| || || | ||||| || | | Sbjct 109513 TGGACATT--TAGACCAATGCCGCCGGCCATTTTTGATATCATGGCGCAGGTCTTCAGAG 109570 Query 66385 TATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTT 66444 | || ||||||||||| ||| || ||| |||||| | ||||| ||| |||| | Sbjct 109571 TGTCGTAGATGCCCTCAATAGAGTCTTCCTTCATGTCGACGAGAAAGCAGGACGACAGCT 109630 Query 66445 GGTGAC-GACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCA 66503 ||| | | ||| || || || || || || || |||||||| || || || || Sbjct 109631 -GTGCCTGGGGAGTACCGGCGTTGAACAATGTGGGCGAAGCGTGGGTGAAGCACTTGCTC 109689 Query 66504 GAAAGTAGATTGTACGTCTCAATAGCTGAGTCTATATC----CCATTGATGAATTCCTAC 66559 || | | ||||| |||||||| | || | ||| || |||| || || Sbjct 109690 GACATCAAGTTGTATGTCTCAATGACGCGCTCAACATCGTCGCCCCAGATG----CCAAC 109745 Query 66560 TGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAACAA 66619 || || ||||| | ||||||||| ||||| || | |||||| | | || | | Sbjct 109746 GGCAACGCGCATGATCATGTGCTGTGGTCTCTCGGCAATCTTGCCATCAAGCTTGAGAAG 109805 Query 66620 GTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAA 66678 |||||| | ||||| || ||||| || || || | ||| ||||| || ||||||| Sbjct 109806 ATAGGATCTCTCCAAGGTCTTAAAGCCGAAGTATTGGTAGTTGAAGTCGCGGTCGTAAA 109864 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 658159932721760