Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Colletotrichum_20gloeosporioides_20[genbank_20GCA_5F002189585.1_2020 17-06-09] 1,564 sequences; 57,603,470 total letters Query= NC_004778.3 Length=129593 Score E Sequences producing significant alignments: (Bits) Value seq428 87.8 1e-12 >seq428 Length=571 Score = 87.8 bits (96), Expect = 1e-12 Identities = 142/204 (70%), Gaps = 8/204 (4%) Strand=Plus/Plus Query 18845 GTAGACTCCTTTTGAATATTGTAATCCGCCATTGTTTTGGCGTCC----TCCAGCTGTTT 18900 ||||| ||||| || ||||||||||| |||| || |||||| || ||||| || Sbjct 369 GTAGATTCCTTCTGGATATTGTAATCGGCCAAGGT----GCGTCCATCTTCAAGCTGCTT 424 Query 18901 ACCCGCATAAATAAGTCTCTGCTGATCCACGGGCACGCCCTCTTTGTCGGCAATTTTCTG 18960 ||| || |||| | | |||||||||| || | || |||||||| ||| || Sbjct 425 ACCAGCGAAAATCAAACGCTGCTGATCCGGAGGGATACCTTCTTTGTCTTGAATCTTGGT 484 Query 18961 TTTTACCTGGCCGACAGTATCGCCAGGCTCCGTTTCGACGGTAATGGTTTTACCTGTTAA 19020 || || | | ||| || |||| ||| |||| ||| |||||||| || |||| Sbjct 485 CTTGACATTGTCGATGGTGTCGCTGCTCTCGACCTCGAGGGTGATGGTTTTCCCGGTTAG 544 Query 19021 AGTTTTGACAAAAATTTGCATTTT 19044 ||||| || ||||| |||||||| Sbjct 545 GGTTTTCACGAAAATCTGCATTTT 568 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 414564897724216