Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Colletotrichum_20gloeosporioides_20[genbank_20GCA_5F002189585.1_2020 17-06-09] 1,564 sequences; 57,603,470 total letters Query= NC_005337.1 Length=134431 Score E Sequences producing significant alignments: (Bits) Value seq746 100 2e-16 >seq746 Length=525449 Score = 100 bits (110), Expect = 2e-16 Identities = 126/173 (73%), Gaps = 0/173 (0%) Strand=Plus/Plus Query 5581 GCGCTCGCAGATCAGCTGCGCTATTCGGTCGCCCGTCTTTACCTCGAAATCGTTGTGGCC 5640 ||||||| || ||||| || || ||||| ||| |||||||| ||| || | | Sbjct 256992 GCGCTCGACGACGAGCTGGGCGATACGGTCACCCTCAGCGACCTCGAAGTCGGAGTCGGC 257051 Query 5641 GAAGTTGAACAGCACCACGCCCACGTTGCCGCGGTAGTCGGCGTCTATCACGCCCGCGCC 5700 | |||||| || | || || | |||||||||||| ||||| || ||||| ||||| Sbjct 257052 GTGGTTGAAGAGGAGGACCTTGACCTCGCCGCGGTAGTCCGCGTCGATGACGCCGGCGCC 257111 Query 5701 CACGTCGATGAAGTGCTTGACCGCCAGGCCGGAGCGGGGAGCCACGCGGCCGT 5753 ||||||||||| |||| || || |||||||| || || |||||||||| Sbjct 257112 GGTGTCGATGAAGTTCTTGGAGGCGAGACCGGAGCGAGGGGCAACGCGGCCGT 257164 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 430046202625568