Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Colletotrichum_20gloeosporioides_20[genbank_20GCA_5F002189585.1_2020
17-06-09] 1,564 sequences; 57,603,470 total letters
Query= NC_005337.1
Length=134431
Score E
Sequences producing significant alignments: (Bits) Value
seq746 100 2e-16
>seq746
Length=525449
Score = 100 bits (110), Expect = 2e-16
Identities = 126/173 (73%), Gaps = 0/173 (0%)
Strand=Plus/Plus
Query 5581 GCGCTCGCAGATCAGCTGCGCTATTCGGTCGCCCGTCTTTACCTCGAAATCGTTGTGGCC 5640
||||||| || ||||| || || ||||| ||| |||||||| ||| || | |
Sbjct 256992 GCGCTCGACGACGAGCTGGGCGATACGGTCACCCTCAGCGACCTCGAAGTCGGAGTCGGC 257051
Query 5641 GAAGTTGAACAGCACCACGCCCACGTTGCCGCGGTAGTCGGCGTCTATCACGCCCGCGCC 5700
| |||||| || | || || | |||||||||||| ||||| || ||||| |||||
Sbjct 257052 GTGGTTGAAGAGGAGGACCTTGACCTCGCCGCGGTAGTCCGCGTCGATGACGCCGGCGCC 257111
Query 5701 CACGTCGATGAAGTGCTTGACCGCCAGGCCGGAGCGGGGAGCCACGCGGCCGT 5753
||||||||||| |||| || || |||||||| || || ||||||||||
Sbjct 257112 GGTGTCGATGAAGTTCTTGGAGGCGAGACCGGAGCGAGGGGCAACGCGGCCGT 257164
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 430046202625568
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |