Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Colletotrichum_20gloeosporioides_20[genbank_20GCA_5F002189585.1_2020
17-06-09] 1,564 sequences; 57,603,470 total letters
Query= NC_007346.1
Length=407339
Score E
Sequences producing significant alignments: (Bits) Value
seq211 374 2e-98
>seq211
Length=153984
Score = 374 bits (414), Expect = 2e-98
Identities = 1184/1798 (66%), Gaps = 58/1798 (3%)
Strand=Plus/Minus
Query 363391 TTCGGATATAAGACGATGGAGAAATCCTACCTATCTCGTA-TCAATGGTGATATTGTTGA 363449
||||| | |||||| |||||| |||||| || |||| | |||| | |||| ||
Sbjct 109835 TTCGGCTTTAAGACCTTGGAGAGATCCTATCT-TCTCAAGCTTGATGGCAAGATTGCCGA 109777
Query 363450 ACGCCCGCAGCATATGTTAATGCGTGTTGCTATTGGTATCCATTGCCCGGATGTTGATGC 363509
| || ||||| ||| | ||||| ||||| |||| ||| || ||||||||
Sbjct 109776 GAGACCACAGCACATGATCATGCGCGTTGCCGTTGGCATCTGGGGCGACGATGTTGAGCG 109717
Query 363510 CGCGATTGAAACATATAAGCTTCTAAGT---GCTCGTGTATTCACGCACGCCACGCCAAC 363566
|| ||||| ||||| || ||| | || || ||| ||||| ||||| |||| ||
Sbjct 109716 CGTCATTGAGACATACAA-CTTG-ATGTCGAGCAAGTGC-TTCACCCACGCTTCGCCCAC 109660
Query 363567 AATGTACAATGCTGGAACTCGTAATCCACAGATGTCTTCTTGCTTTCTTCTAAAAATGAA 363626
| ||| ||| || || |||| | ||||| |||| || |||||||| | | |||||
Sbjct 109659 ATTGTTCAACGCCGGTACTCCCCAGGCACAGCTGTCGTCCTGCTTTCTCGTCGACATGAA 109600
Query 363627 GGACGATTCCATCGAGGGTATCTTTGACACACTTAAGAATTGTGCTCTTATTTCCAAGAA 363686
||| || || || ||||| |||| ||||| || |||| || || | || || || |
Sbjct 109599 GGAAGACTCTATTGAGGGCATCTACGACACTCTGAAGACCTGCGCCATGATATCAAAAAT 109540
Query 363687 TGCAGGCGGAATTGGTGTATCGATCCACAATGTTCGTGC-ACAGAACAGTTACATTCGCG 363745
|| ||||| |||||| || ||||| | ||||| || | | ||||| ||
Sbjct 109539 GGCCGGCGGCATTGGTCTAAATGTCCACCGCATCCGTGCCACTGG-CTCCTACATCGCCG 109481
Query 363746 GCACAGGGGGATACTCGAATGGGCTGGTTCCC--ATGCTTCGTGTGTTTGACAATACTGC 363803
|||| || ||| || || || | ||| ||||| || || || |||| || ||
Sbjct 109480 GCACCAATGGCACCTCCAACGG--TGTTACCCCTATGCTCCGCGTCTTCAACAACACCGC 109423
Query 363804 GAGGTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCGTTTGCTATGTATCTCGAGCC 363863
| || |||||||||||||| |||||| || || ||||| || || ||||||||
Sbjct 109422 CCGCTATGTCGACCAGGGTGGCAACAAGCGCCCCGGTGCCTTTGCCATCTACCTCGAGCC 109363
Query 363864 TCATCATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAAAAACACGGGAAAAGAGGAATT 363923
|||||||| | || |||||| | || ||||| || ||| || || ||||| |
Sbjct 109362 CTGGCATGCCGACGTCTTCGAGTTTTTGGACCTCCGCAAGAACCACGGCAAGGAGGAGGT 109303
Query 363924 GCGTGCACGTGATCTGTTCTATGCACTTTGGGTTTCTGACCATTTTATGAAGCGCGTGGA 363983
||||| ||||| || ||| || |||||| | |||| | || |||||||| |||||
Sbjct 109302 CCGTGCCCGTGACCTTTTCCTCGCCCTTTGGATCCCTGATCTCTTCATGAAGCGAGTGGA 109243
Query 363984 GGCAGGTAAG--AATTGGTCACTCTTTTGCCCACACGAATGTCCAGGTCTTTCCGA-TG- 364039
| | | | | | ||| |||| | || || |||| || || |||||| |||| ||
Sbjct 109242 G--AAGAACGGTGACTGGACACTGATGTGTCCCAACGAGTGCCCGGGTCTTGCCGACTGC 109185
Query 364040 TATGGGGTGACGACTATGTTGCTCTATACGAAAAGTATGAATCGGAGGGAAAGGCTCGTA 364099
||| || || || | | || | ||||| ||||| || || || |||| ||| |
Sbjct 109184 TAT--GGCGAGGAATTCGAAGCCTTGTACGAGAAGTACGAGCGCGAAGGCAAGGGTCGAA 109127
Query 364100 AGACAATTCCCGCACAGAAGCTATGGTTTGCCATCATGGATTCGCAGATTGAGACAGGAA 364159
|||| || || |||||||| |||| |||||| | || | |||| |||||| || |
Sbjct 109126 AGACCATGAAGGCCCAGAAGCTCTGGTATGCCATTCTCGAGGCCCAGACTGAGACCGGCA 109067
Query 364160 CACCCTAT-ATGTTGTACAAAGATTCGTG-CAACCGCAAGTCCAACCAGCAGCACCTTGG 364217
||||| | ||| | ||||| || || || |||||||||| ||||||| || | || ||
Sbjct 109066 -ACCCTTTCATGCTCTACAAGGA-TCATGCCAACCGCAAGAGCAACCAGAAGAATCTCGG 109009
Query 364218 TACAATTCAGCAG-AGCAACCTATGTACCGAGATTATTGAATACACCGCTCCCGACGAGA 364276
|| |||| | || |||||| || || || || ||||| ||| | || || ||||||
Sbjct 109008 CACCATTC-GAAGCTCCAACCTTTGCACGGAAATCATTGAGTACTCGGCCCCTGACGAGG 108950
Query 364277 CTGCCGTATGTAACCTTGCGTCGATCGCGCTTCCGGCGTTTGTAAA------AGATGGTA 364330
||||| || ||| | ||||| | || || || | || || || || || |
Sbjct 108949 TCGCCGTCTGCAACTTGGCGTCCCTTGCTCTCCCTTCTTTCGTGAACTACAGCGACGGAA 108890
Query 364331 CTTTTGACCACCAGCATCTTTATGACGTAACCTATCATGCTACTTGCAATCTCGACAAGG 364390
| |||| |||| | || | || || ||| | || | | |||| || | | |
Sbjct 108889 TCTATGACTTCCAGAAGCTACACGATGTCACCCAGGTTGTTGTTCGCAACCTGAATAGGA 108830
Query 364391 TTATCGACAAGAATTATTATCCAATTCCTGAAGC-CG----AGCGTTCTAATATGCGTCA 364445
| |||||| || | ||||| | || || || || ||| || ||||| ||
Sbjct 108829 TCATCGACGTCAACCACTATCCCGTCCCGGAGGCTCGCAACAGC-----AACATGCGCCA 108775
Query 364446 TCGCCCGATTGGTCTTGGTGTACAGGGCCTCGCTGACGTTTTTATGATGC-TCAAGA-TG 364503
||| || ||||| || ||||| ||||| || ||||| | || || || | || ||
Sbjct 108774 TCGGCCCATTGGCCTCGGTGTCCAGGGTCTTGCTGATGCATTCTTG--GCTTTGCGACTG 108717
Query 364504 GCATTTGATTCGCCTGACGCTCGTGTTCTAAATAAGGAGATCTTTGAAACAATGTATTTT 364563
| || || |||||||| ||||||| || || ||| ||||||| || || || ||
Sbjct 108716 CCGTTCGAGTCGCCTGAGGCTCGTGAACTGAACAAGAAGATCTTCGAGACCATCTACCAC 108657
Query 364564 GCCGCAATGACTGCTTC-GTGTGATTTGGCAAAAACCAAGGGAAAGTACTCTACTTATGA 364622
|| || | || || ||| | | || || |||| | || || |||||||
Sbjct 108656 GCTGCTCTCACCATGTCAGTG-CAGCTAGCCAAGGAGGAGGGCACCTATTCGTCTTATGA 108598
Query 364623 GGGGTCCCCTCTTTCGCAGGGAAAATTCCAGTTTGATCTATGGAATGTCACGCCATCTGT 364682
|| ||||| | || ||||| | || | ||| | ||| |||| ||| || |
Sbjct 108597 AGGCTCCCCAGTCTCACAGGGCGTCCTTCAATATGACATGTGGGGAGTCAAGCCCTCCGA 108538
Query 364683 CCGATGGAACTGGGATACGCT-ACGTTCCAACGTTAAGAAGCATGGTACTCG---CAACT 364738
|| ||| |||||||| | || | | | | | ||| |||||||| || || ||
Sbjct 108537 CCTCTGGGACTGGGATTCTCTCAAGGAAC-AGATCAAGCAGCATGGTGTGCGTAACAGCT 108479
Query 364739 CCCTCGTTACAGCGCCCATGCCCACGGCTTCTACTGCACAGATCCTCGGAAACAACGAGT 364798
||||| || |||||||| || || |||| | ||||| || || |||||||| |
Sbjct 108478 TGCTCGT---CGCCCCCATGCCAACCGCCAGTACTTCCCAGATTCTGGGCAACAACGAAT 108422
Query 364799 GCTTCGAACCGTTTACAAGCAATCTTTATTCACGCCGGGTTCTTTCCGGAGAATTTCCGG 364858
|||| || || | || ||| | || || || || | | || || |||| ||
Sbjct 108421 GCTTTGAGCCTTACACCTCCAACATCTACCAGCGTCGCGTCTTGGCTGGTGAGTTTCAGG 108362
Query 364859 TAGTTAATAAGTACCTAGTCAAGGATCTTTCCGACCGCGGGCTGTGGGGTGACAGCATGA 364918
| || || | || ||||||| || |||| || ||||| ||| |||||
Sbjct 108361 TTGTCAACCCTTGGCTCCTCAAGGACCTCGTCGACATGGGCTTGTGGTCTGATGCCATGA 108302
Query 364919 AGAACTATATCATCGCCGCTAATGGTTCTGTGCAGAACATTCCAGGATTTCCAGAAGATC 364978
||||| || || || | ||||| || |||||||||||||| |||| | ||
Sbjct 108301 AGAACCGCATTATTGCTGAGAATGGCTCCGTGCAGAACATTCCCAACATTCCCGCCGAGG 108242
Query 364979 TGAAGCCTATTTACAAAACCGTATGGGAAATTTCCATGCGAACTCTCATTGATATGGCGG 365038
| ||| | | ||||||||||| |||||||||||| || || || || | ||||| |
Sbjct 108241 TCAAGGCCCTGTACAAAACCGTCTGGGAAATTTCCCAACGTACCGTCGTTCAGATGGCCG 108182
Query 365039 CCGATCGCGGTGCTTTTATCTGTCAGAGCCAGTCGTTTAACGTATTCATGACTCAGCCAA 365098
|||| || || || |||||| ||| |||||| | ||| | ||||| | || |
Sbjct 108181 CCGACCGTGGCGCCTTTATCGACCAGTCCCAGTCCCTCAACATTCACATGAAAGACCCGA 108122
Query 365099 CCTCCGCCAAGCTTACATCCATGCATTTCTACGGGTGGAAATCCGGTCTTAAGACAGG 365156
|| | |||| | || |||||||||| || ||||| || || ||||| ||
Sbjct 108121 CCATGGGCAAGATCACTAGCATGCATTTCGCAGGCTGGAAGCTAGGGCTGAAGACCGG 108064
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1303327482423048
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |