Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Colletotrichum_20gloeosporioides_20[genbank_20GCA_5F002189585.1_2020 17-06-09] 1,564 sequences; 57,603,470 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq211 374 2e-98 >seq211 Length=153984 Score = 374 bits (414), Expect = 2e-98 Identities = 1184/1798 (66%), Gaps = 58/1798 (3%) Strand=Plus/Minus Query 363391 TTCGGATATAAGACGATGGAGAAATCCTACCTATCTCGTA-TCAATGGTGATATTGTTGA 363449 ||||| | |||||| |||||| |||||| || |||| | |||| | |||| || Sbjct 109835 TTCGGCTTTAAGACCTTGGAGAGATCCTATCT-TCTCAAGCTTGATGGCAAGATTGCCGA 109777 Query 363450 ACGCCCGCAGCATATGTTAATGCGTGTTGCTATTGGTATCCATTGCCCGGATGTTGATGC 363509 | || ||||| ||| | ||||| ||||| |||| ||| || |||||||| Sbjct 109776 GAGACCACAGCACATGATCATGCGCGTTGCCGTTGGCATCTGGGGCGACGATGTTGAGCG 109717 Query 363510 CGCGATTGAAACATATAAGCTTCTAAGT---GCTCGTGTATTCACGCACGCCACGCCAAC 363566 || ||||| ||||| || ||| | || || ||| ||||| ||||| |||| || Sbjct 109716 CGTCATTGAGACATACAA-CTTG-ATGTCGAGCAAGTGC-TTCACCCACGCTTCGCCCAC 109660 Query 363567 AATGTACAATGCTGGAACTCGTAATCCACAGATGTCTTCTTGCTTTCTTCTAAAAATGAA 363626 | ||| ||| || || |||| | ||||| |||| || |||||||| | | ||||| Sbjct 109659 ATTGTTCAACGCCGGTACTCCCCAGGCACAGCTGTCGTCCTGCTTTCTCGTCGACATGAA 109600 Query 363627 GGACGATTCCATCGAGGGTATCTTTGACACACTTAAGAATTGTGCTCTTATTTCCAAGAA 363686 ||| || || || ||||| |||| ||||| || |||| || || | || || || | Sbjct 109599 GGAAGACTCTATTGAGGGCATCTACGACACTCTGAAGACCTGCGCCATGATATCAAAAAT 109540 Query 363687 TGCAGGCGGAATTGGTGTATCGATCCACAATGTTCGTGC-ACAGAACAGTTACATTCGCG 363745 || ||||| |||||| || ||||| | ||||| || | | ||||| || Sbjct 109539 GGCCGGCGGCATTGGTCTAAATGTCCACCGCATCCGTGCCACTGG-CTCCTACATCGCCG 109481 Query 363746 GCACAGGGGGATACTCGAATGGGCTGGTTCCC--ATGCTTCGTGTGTTTGACAATACTGC 363803 |||| || ||| || || || | ||| ||||| || || || |||| || || Sbjct 109480 GCACCAATGGCACCTCCAACGG--TGTTACCCCTATGCTCCGCGTCTTCAACAACACCGC 109423 Query 363804 GAGGTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCGTTTGCTATGTATCTCGAGCC 363863 | || |||||||||||||| |||||| || || ||||| || || |||||||| Sbjct 109422 CCGCTATGTCGACCAGGGTGGCAACAAGCGCCCCGGTGCCTTTGCCATCTACCTCGAGCC 109363 Query 363864 TCATCATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAAAAACACGGGAAAAGAGGAATT 363923 |||||||| | || |||||| | || ||||| || ||| || || ||||| | Sbjct 109362 CTGGCATGCCGACGTCTTCGAGTTTTTGGACCTCCGCAAGAACCACGGCAAGGAGGAGGT 109303 Query 363924 GCGTGCACGTGATCTGTTCTATGCACTTTGGGTTTCTGACCATTTTATGAAGCGCGTGGA 363983 ||||| ||||| || ||| || |||||| | |||| | || |||||||| ||||| Sbjct 109302 CCGTGCCCGTGACCTTTTCCTCGCCCTTTGGATCCCTGATCTCTTCATGAAGCGAGTGGA 109243 Query 363984 GGCAGGTAAG--AATTGGTCACTCTTTTGCCCACACGAATGTCCAGGTCTTTCCGA-TG- 364039 | | | | | | ||| |||| | || || |||| || || |||||| |||| || Sbjct 109242 G--AAGAACGGTGACTGGACACTGATGTGTCCCAACGAGTGCCCGGGTCTTGCCGACTGC 109185 Query 364040 TATGGGGTGACGACTATGTTGCTCTATACGAAAAGTATGAATCGGAGGGAAAGGCTCGTA 364099 ||| || || || | | || | ||||| ||||| || || || |||| ||| | Sbjct 109184 TAT--GGCGAGGAATTCGAAGCCTTGTACGAGAAGTACGAGCGCGAAGGCAAGGGTCGAA 109127 Query 364100 AGACAATTCCCGCACAGAAGCTATGGTTTGCCATCATGGATTCGCAGATTGAGACAGGAA 364159 |||| || || |||||||| |||| |||||| | || | |||| |||||| || | Sbjct 109126 AGACCATGAAGGCCCAGAAGCTCTGGTATGCCATTCTCGAGGCCCAGACTGAGACCGGCA 109067 Query 364160 CACCCTAT-ATGTTGTACAAAGATTCGTG-CAACCGCAAGTCCAACCAGCAGCACCTTGG 364217 ||||| | ||| | ||||| || || || |||||||||| ||||||| || | || || Sbjct 109066 -ACCCTTTCATGCTCTACAAGGA-TCATGCCAACCGCAAGAGCAACCAGAAGAATCTCGG 109009 Query 364218 TACAATTCAGCAG-AGCAACCTATGTACCGAGATTATTGAATACACCGCTCCCGACGAGA 364276 || |||| | || |||||| || || || || ||||| ||| | || || |||||| Sbjct 109008 CACCATTC-GAAGCTCCAACCTTTGCACGGAAATCATTGAGTACTCGGCCCCTGACGAGG 108950 Query 364277 CTGCCGTATGTAACCTTGCGTCGATCGCGCTTCCGGCGTTTGTAAA------AGATGGTA 364330 ||||| || ||| | ||||| | || || || | || || || || || | Sbjct 108949 TCGCCGTCTGCAACTTGGCGTCCCTTGCTCTCCCTTCTTTCGTGAACTACAGCGACGGAA 108890 Query 364331 CTTTTGACCACCAGCATCTTTATGACGTAACCTATCATGCTACTTGCAATCTCGACAAGG 364390 | |||| |||| | || | || || ||| | || | | |||| || | | | Sbjct 108889 TCTATGACTTCCAGAAGCTACACGATGTCACCCAGGTTGTTGTTCGCAACCTGAATAGGA 108830 Query 364391 TTATCGACAAGAATTATTATCCAATTCCTGAAGC-CG----AGCGTTCTAATATGCGTCA 364445 | |||||| || | ||||| | || || || || ||| || ||||| || Sbjct 108829 TCATCGACGTCAACCACTATCCCGTCCCGGAGGCTCGCAACAGC-----AACATGCGCCA 108775 Query 364446 TCGCCCGATTGGTCTTGGTGTACAGGGCCTCGCTGACGTTTTTATGATGC-TCAAGA-TG 364503 ||| || ||||| || ||||| ||||| || ||||| | || || || | || || Sbjct 108774 TCGGCCCATTGGCCTCGGTGTCCAGGGTCTTGCTGATGCATTCTTG--GCTTTGCGACTG 108717 Query 364504 GCATTTGATTCGCCTGACGCTCGTGTTCTAAATAAGGAGATCTTTGAAACAATGTATTTT 364563 | || || |||||||| ||||||| || || ||| ||||||| || || || || Sbjct 108716 CCGTTCGAGTCGCCTGAGGCTCGTGAACTGAACAAGAAGATCTTCGAGACCATCTACCAC 108657 Query 364564 GCCGCAATGACTGCTTC-GTGTGATTTGGCAAAAACCAAGGGAAAGTACTCTACTTATGA 364622 || || | || || ||| | | || || |||| | || || ||||||| Sbjct 108656 GCTGCTCTCACCATGTCAGTG-CAGCTAGCCAAGGAGGAGGGCACCTATTCGTCTTATGA 108598 Query 364623 GGGGTCCCCTCTTTCGCAGGGAAAATTCCAGTTTGATCTATGGAATGTCACGCCATCTGT 364682 || ||||| | || ||||| | || | ||| | ||| |||| ||| || | Sbjct 108597 AGGCTCCCCAGTCTCACAGGGCGTCCTTCAATATGACATGTGGGGAGTCAAGCCCTCCGA 108538 Query 364683 CCGATGGAACTGGGATACGCT-ACGTTCCAACGTTAAGAAGCATGGTACTCG---CAACT 364738 || ||| |||||||| | || | | | | | ||| |||||||| || || || Sbjct 108537 CCTCTGGGACTGGGATTCTCTCAAGGAAC-AGATCAAGCAGCATGGTGTGCGTAACAGCT 108479 Query 364739 CCCTCGTTACAGCGCCCATGCCCACGGCTTCTACTGCACAGATCCTCGGAAACAACGAGT 364798 ||||| || |||||||| || || |||| | ||||| || || |||||||| | Sbjct 108478 TGCTCGT---CGCCCCCATGCCAACCGCCAGTACTTCCCAGATTCTGGGCAACAACGAAT 108422 Query 364799 GCTTCGAACCGTTTACAAGCAATCTTTATTCACGCCGGGTTCTTTCCGGAGAATTTCCGG 364858 |||| || || | || ||| | || || || || | | || || |||| || Sbjct 108421 GCTTTGAGCCTTACACCTCCAACATCTACCAGCGTCGCGTCTTGGCTGGTGAGTTTCAGG 108362 Query 364859 TAGTTAATAAGTACCTAGTCAAGGATCTTTCCGACCGCGGGCTGTGGGGTGACAGCATGA 364918 | || || | || ||||||| || |||| || ||||| ||| ||||| Sbjct 108361 TTGTCAACCCTTGGCTCCTCAAGGACCTCGTCGACATGGGCTTGTGGTCTGATGCCATGA 108302 Query 364919 AGAACTATATCATCGCCGCTAATGGTTCTGTGCAGAACATTCCAGGATTTCCAGAAGATC 364978 ||||| || || || | ||||| || |||||||||||||| |||| | || Sbjct 108301 AGAACCGCATTATTGCTGAGAATGGCTCCGTGCAGAACATTCCCAACATTCCCGCCGAGG 108242 Query 364979 TGAAGCCTATTTACAAAACCGTATGGGAAATTTCCATGCGAACTCTCATTGATATGGCGG 365038 | ||| | | ||||||||||| |||||||||||| || || || || | ||||| | Sbjct 108241 TCAAGGCCCTGTACAAAACCGTCTGGGAAATTTCCCAACGTACCGTCGTTCAGATGGCCG 108182 Query 365039 CCGATCGCGGTGCTTTTATCTGTCAGAGCCAGTCGTTTAACGTATTCATGACTCAGCCAA 365098 |||| || || || |||||| ||| |||||| | ||| | ||||| | || | Sbjct 108181 CCGACCGTGGCGCCTTTATCGACCAGTCCCAGTCCCTCAACATTCACATGAAAGACCCGA 108122 Query 365099 CCTCCGCCAAGCTTACATCCATGCATTTCTACGGGTGGAAATCCGGTCTTAAGACAGG 365156 || | |||| | || |||||||||| || ||||| || || ||||| || Sbjct 108121 CCATGGGCAAGATCACTAGCATGCATTTCGCAGGCTGGAAGCTAGGGCTGAAGACCGG 108064 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303327482423048