Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Colletotrichum_20gloeosporioides_20[genbank_20GCA_5F002189585.1_2020 17-06-09] 1,564 sequences; 57,603,470 total letters Query= NC_008725.1 Length=111953 Score E Sequences producing significant alignments: (Bits) Value seq428 93.3 3e-14 >seq428 Length=571 Score = 93.3 bits (102), Expect = 3e-14 Identities = 148/210 (70%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 21829 GCAAAATGCAAATATTTATTAAAACATTAACGGGCAAAACCATTACCGTGGAAACGGA-A 21887 |||||||||| || || | ||||| |||| || |||||||| ||| | || || | Sbjct 570 GCAAAATGCAGATTTTCGTGAAAACCCTAACCGGGAAAACCATCACCCTCGAGGTCGAGA 511 Query 21888 GCCGCAGAAACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAGGGTGTACCTGTA 21947 || || || || | | | || | ||| || ||| || ||||| ||| | ||| Sbjct 510 GCAGC-GACACCATCGACAATGTCAAGACCAAGATTCAAGACAAAGAAGGTATCCCTCCG 452 Query 21948 AACCAACAGAGACTTATCTTTGCTGGCAAACAACTAGAAGATTTAAAAACTATGGCCGAT 22007 | || ||| | | || || ||||| || || || |||||| | || |||||||| Sbjct 451 GATCAGCAGCGTTTGATTTTCGCTGGTAAGCAGCTTGAAGATGGACGCACCTTGGCCGAT 392 Query 22008 TACAATATTCAGAAGGAATCTACTCTTCAT 22037 |||||||| ||||||||||||||||||||| Sbjct 391 TACAATATCCAGAAGGAATCTACTCTTCAT 362 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 358117973693656