Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Colletotrichum_20gloeosporioides_20[genbank_20GCA_5F002189585.1_2020
17-06-09] 1,564 sequences; 57,603,470 total letters
Query= NC_009127.1
Length=295146
Score E
Sequences producing significant alignments: (Bits) Value
seq1201 399 4e-106
seq211 390 2e-103
>seq1201
Length=295393
Score = 399 bits (442), Expect = 4e-106
Identities = 605/849 (71%), Gaps = 24/849 (3%)
Strand=Plus/Minus
Query 42309 ATGTACAAGAAGGCGCAGTTCTCCAACTGGACCGCCGAGGAGATTGACCTGGCCAAGGAC 42368
|||||||||||||| || ||| |||||| || ||||||||||| || |||||||
Sbjct 157046 ATGTACAAGAAGGCCGAGGCCTCTTTCTGGACTGCTGAGGAGATTGATTTGTCCAAGGAT 156987
Query 42369 ACGGCCGGCTGGGAGT-CACTGTCTGAGA--ACGAAAAGTTTTTCCTCAAAAACATACTG 42425
|| |||| | || || || | || |||| ||| || |||| ||
Sbjct 156986 CTCCACGACTGGAACAACAAGATCAACGATGATGAGAAGTACTTCATCTCTCACATTCTC 156927
Query 42426 GCCTTCTTCGCCGCCTCTGACGGCATAGTCAATGAGAACCTGGCCACCAGGTTCATGAAA 42485
|||||||||||||| || |||||||| |||||||||||||||| | |||
Sbjct 156926 GCCTTCTTCGCCGCTTCCGACGGCATCGTCAATGAGAACCTGGTTGAGCGTTTCTCTGGC 156867
Query 42486 GAGGTGCAGTACTTTGAGGCGCGCTGCTTCTACGGCTTCCAGATAGCCATAGAGAACGTG 42545
|| || ||| | ||||||||||||||||||||||||||||| || |||||| |
Sbjct 156866 GAAGTCCAGGTCCCCGAGGCGCGCTGCTTCTACGGCTTCCAGATCATGATGGAGAACATT 156807
Query 42546 CACTCTGAGGTGTACGCCAAACTGCTCAACACGTACATCCTGGATCCCGTCGAGCGTAAC 42605
||||| ||| ||| || || || |||| ||||| ||| || | | |||||| |
Sbjct 156806 CACTCCGAGACTTACTCCCTTCTCATCGACACCTACATTAAGGAGCCTGCCCAGCGTACC 156747
Query 42606 GGGCTGTTCAAGGCCATGGAGACGATGCCCTGCATCAAGAAGAAGGCGGACTGGGCGCTC 42665
|| ||||| ||||| || || || ||||||||| |||||||| |||||||| |
Sbjct 156746 TATCTCTTCAACGCCATCGACACCATCCCCTGCATCCGTAAGAAGGCTGACTGGGCCTTG 156687
Query 42666 AACTGGATCGAGAGTCCCGACG-CAACGTTCGGCGAGAGGCTGGTAGCCTTTACCGCCGT 42724
||||||| | | | | | | | || |||| | || | || || |||||| |||||||
Sbjct 156686 CGCTGGATCACG-GACACAAAGTCCACCTTCGCCCAGCGCCTCGTTGCCTTTGCCGCCGT 156628
Query 42725 CGAGGGCATCTTCTTCTCGGGCGCCTTCGCCTCCATCTTCTGGCTCAAGCAGAA-GGTGT 42783
|||||||||||||||| || || |||||||||||||||||||||||| || ||| |
Sbjct 156627 CGAGGGCATCTTCTTCAGCGGTGCTTTCGCCTCCATCTTCTGGCTCAAGAAGCGTGGTCT 156568
Query 42784 CGATGCCCGGACTCACCTTCTCGAACGAACTCATCAGCAGGGACGAGGGGCTGCATAGGG 42843
| |||||||| || |||||||| ||||| |||||| | | || ||||| || || | |
Sbjct 156567 C-ATGCCCGGTCTAACCTTCTCCAACGAGCTCATCTCCCGTGATGAGGGTCTCCACACCG 156509
Query 42844 ACTTTGCCTGCCTCCTGTTCTCGAGCCACCTCAGGCACAAGCCCTCGAAGGAGCGGGTCC 42903
||||||||||||| |||| ||| ||||| | |||| ||| ||| || | |
Sbjct 156508 ACTTTGCCTGCCTTCTGTACTCT---CACCTGAAGCACCGCCCCAGCAAGCAGGTGATTG 156452
Query 42904 GGGCCATCATCACGGAGGCCGTGGAGATCGAGAAGGAGTTCCTCACGCAGTCGCTGCCCG 42963
|| || ||| || || || |||||||| | |||||||| || || | |||||
Sbjct 156451 AGGATATTATCGTCGATGCTGTCAAGATCGAGCAAGAGTTCCTGACCGAGGCTCTGCCTT 156392
Query 42964 TGTCCCTGGTCGGCATGAACCACGACCTCATGT-GCAAGTACATCCAGTACGTCGCCGAC 43022
|||| | ||||||||| | |||| ||| |||| |||||| ||| |||||| ||
Sbjct 156391 GCGCCCTCCTGGGCATGAACTCCAACCTGATGAAGCAA-TACATCGAGTTCGTCGCTGAT 156333
Query 43023 CATCTCCTGTGCCAGATGGGTCTCAGC--CGCC----TCTACAACACGCCGTGCCCCTTC 43076
| ||| || | | |||| || || | ||||||| || | |||||||
Sbjct 156332 CGTCTGTTGGTC------GCTCTCGGCAACGACAAGGTCTACAAATCGGCCAACCCCTTC 156279
Query 43077 GACTTTATGGAGAACATCTCGTTGGAGGGCAAGACCAACTTTTTCGAGAAGCGCGTCGCC 43136
||||| |||||||||||||| | | |||||||||||||| || |||||||| ||||||
Sbjct 156278 GACTTCATGGAGAACATCTCTCTTGGTGGCAAGACCAACTTCTTTGAGAAGCGTGTCGCC 156219
Query 43137 GACTACCAG 43145
|||||||||
Sbjct 156218 GACTACCAG 156210
>seq211
Length=153984
Score = 390 bits (432), Expect = 2e-103
Identities = 1059/1594 (66%), Gaps = 65/1594 (4%)
Strand=Plus/Plus
Query 243877 GTTGAGGGACTGGCTCTGGTCGACGAAGGGCGCC-CGCTCTGCGGCCATGGTGATGA-GG 243934
||||||||||||| |||||||| |||| |||| || || |||||||| | || ||
Sbjct 108141 GTTGAGGGACTGGGACTGGTCGATAAAGG-CGCCACGGTCGGCGGCCATCTGAACGACGG 108199
Query 243935 TCC-TTCTGAGATATCTCATACGCCGTCTTGTAGATGGGCTTGAGGTGCTCGG--GGAAC 243991
| | || || || || || ||| || ||||| | || ||||| ||||| ||||
Sbjct 108200 TACGTTGGGAAATTTCCCAGACG--GTTTTGTACAGGGCCTTGAC---CTCGGCGGGAAT 108254
Query 243992 CCTTCGA-TGTTCTGCACCGAGCCCTTGTGGACGATGAGCTGGGTGCGCATGTTATCGTT 244050
| || |||||||||| ||||| || | | || | || | |||| |||
Sbjct 108255 GTTGGGAATGTTCTGCACGGAGCCATTCTCAGCAATAATGCGGTTCTTCATGGCATCAGA 108314
Query 244051 CCACAGGCCCAAGCGCTCCAGCGCCTCGACCAGGTGCCT---GTTCACCACCTGAAACTC 244107
||||| ||||| | | || ||| || || ||| ||| || |||||||||||
Sbjct 108315 CCACAAGCCCATGTCGACGAGGTCCTTGA---GGAGCCAAGGGTTGACAACCTGAAACTC 108371
Query 244108 TCCCGACAGCACGCGGCGCTGGTAGAGGTTGCTGCTGAGCGGCTCGATGCTCTCCGTGTT 244167
|| | || ||||| |||||||||| |||| | || ||||| | || || ||||
Sbjct 108372 ACCAGCCAAGACGCGACGCTGGTAGATGTTGGAGGTGTAAGGCTCAAAGCATTCGTTGTT 108431
Query 244168 GCCCAGTATCTGCGCCGTGCTCGCAGTCGGCATGGGCGACACCAGCAGACTGTTCCTCAC 244227
|||||| ||||| | || || || || |||||||| | || |||| ||||| | |||
Sbjct 108432 GCCCAGAATCTGGGAAGTACTGGCGGTTGGCATGGGGGCGACGAGCAAGCTGTTACGCAC 108491
Query 244228 GCCGTGCCTCTGGATGCGGAGTCTGAGCTCGTTCCAGTCCCACATGCCCGAGAGGTCCTC 244287
|| ||| || ||| | |||| | ||||||||| ||||||
Sbjct 108492 ACCATGCTGCTTGATCTGTTCCTTGAGAGAATCCCAGTCCCA---------GAGGTCGGA 108542
Query 244288 GCGTTTGAGGCCCCACATGTCAAACTGCAGCAGCCCCTTGCTGACGGGGCTGCCCTCGTA 244347
| | |||| |||||||||||| | || || | |||| ||| ||| ||| || ||
Sbjct 108543 GGGCTTGACTCCCCACATGTCATATTGAAGGACGCCCTGTGAGACTGGGGAGCCTTCATA 108602
Query 244348 GGTCGGGTAGGGACCGTCGCGCTGGGCCAGCTT-ACAGCTCTCGTCGAGGGCGGCGTAGT 244406
| || |||| || || || ||| |||| || | | || ||| || |||| ||
Sbjct 108603 AGACGAATAGGTGCCCTCCTCCTTGGCTAGCTGCACTGACATGGT-GAGAGCAGCGTGGT 108661
Query 244407 AGATGGTCTCGAAGATCATCTTGTTCATGTCGCGGGCCTT-GCCGCAGGTGAAGGGGATG 244465
||||||||||||||||| ||||||||| || || |||| | || | ||| || |
Sbjct 108662 AGATGGTCTCGAAGATCTTCTTGTTCAGTTCACGAGCCTCAGGCG-ACTCGAACGGCAGT 108720
Query 244466 CCCATCATCATGAAGACGTCGGCCAGTCCCTGCACGCCGATGCCGATGGGTCTGTGTCGC 244525
| || || ||| | || || || ||||| || |||| ||| ||||| | || |||
Sbjct 108721 CGCAAAGCCAAGAATGCATCAGCAAGACCCTGGACACCGAGGCCAATGGGCCGATGGCGC 108780
Query 244526 TTGTTGGAGC-GCATGGCTTCGGGCACGGGGTAAAAGTTGCCGTCGATCACCTTGTTGAG 244584
||||| | || | || |||| ||||| || |||| ||||||| | | | || ||
Sbjct 108781 ATGTTGCTGTTGCGAGCCTCCGGG-ACGGGATAGTGGTTGACGTCGATGATCCTATTCAG 108839
Query 244585 GTTGCGGGTGATCATGCGGACGACGTCGGCCAGCAGCTGAAAGTCGTACTCGTAGGGATC 244644
|||||| | | || ||| ||| ||| ||| ||||| || |||
Sbjct 108840 GTTGCGAACAACAACCTGGGTGACATCGTGTAGCTTCTGGAAGTCATA--------GATT 108891
Query 244645 CTCGGCGATGGTGATCCTCACAAACTCGTTGAGGGCGACGCTGGCCAGGTTGCAGACGGC 244704
| || || || | || || || ||| || | | |||| ||||||||||||
Sbjct 108892 C-CGTCGCTGTAGTTC---ACGAAAGAAGGGAGAGCAAGGGACGCCAAGTTGCAGACGGC 108947
Query 244705 CACCTCCTCCGAGTTGGTGTACTGGACAATCTCGGTGCAGAGGTTACTGCACTTGATGGT 244764
||||| || | | | ||||| | || || ||||| ||||| || |||||
Sbjct 108948 GACCTCGTCAGGGGCCGAGTACTCAATGATTTCCGTGCAAAGGTTGGAGCTTCGAATGGT 109007
Query 244765 GCCCAGGTGCTGGTGATTGGACTTGGCGTT-GCAGGCGTCCTTGTAGAGCATGAAGGGCC 244823
||| || | || || ||| |||| ||| ||| | ||||||||||||||||| ||
Sbjct 109008 GCCGAGATTCTTCTGGTTGCTCTTGCGGTTGGCATG-ATCCTTGTAGAGCATGAAAGGGT 109066
Query 244824 CCCCGGTCTCGAGCTGGGCGACGAGGACGCTGTTCCAGAGGTCCCTAGCCTTGACCGTCC 244883
|||||||| |||||| |||| | | | |||||| | | ||||| | |||
Sbjct 109067 TGCCGGTCTCAGTCTGGGCCTCGAGAATGGCATACCAGAGCTTCTGGGCCTTCATGGTCT 109126
Query 244884 TGCGAGCCTTGCCCTCTGCCTCGTAGCGGGTGTACAGGGCCTCGAACTCGGGGCCCCAGA 244943
| ||| ||||||| || |||||| ||||| ||| ||||| || ||| ||
Sbjct 109127 TTCGACCCTTGCCTTCGCGCTCGTACTTCTCGTACAAGGCTTCGAATTCCTCGCCATAGC 109186
Query 244944 CCTCGTCTAGGCCGGGGCACGACGCCGGG-CACATGAGACTCCACTCGCCGCCGTCCTTG 245002
||| | || || |||||| || ||| ||||| || |||| || ||| | ||
Sbjct 109187 AGTCGGCAAGACCCGGGCAC-TCGTTGGGACACATCAGTGTCCAGTCACCGTTCTTCTCC 109245
Query 245003 ACCCTCTGCATGAAGAGGTCGGGGATCCAGAGGGCCTGGAAGAGGTCCCTGGTCCTCTGC 245062
|| | || ||||||||| || |||||||| ||||| |||| ||||| | || | |
Sbjct 109246 ACTCGCTTCATGAAGAGATCAGGGATCCAAAGGGCGAGGAAAAGGTCACGGGCACGGACC 109305
Query 245063 TCGTCCGAGCCAGTGTTCTTCCTCAGCTCCAAAAAGTCAAAGACGTCGACGTGCCAGGGC 245122
|| ||| ||| |||||| | || |||||||| || ||||||||| | |||||||||
Sbjct 109306 TCCTCCTTGCCGTGGTTCTTGCGGAGGTCCAAAAACTCGAAGACGTCGGCATGCCAGGGC 109365
Query 245123 TCCATGTAGACAGCGAGGGCGCCGGGCCGCTTGTTGCCTCCCTGGTCCACCATCCTCTCG 245182
|| | ||||| || | ||| ||||| ||||||||||| |||||||| | | | ||
Sbjct 109366 TCGAGGTAGATGGCAAAGGCACCGGGGCGCTTGTTGCCACCCTGGTCGA----CATAGCG 109421
Query 245183 AGCG----CGTTGAAGATGCGCAGGGTAGGCACTATGCCGTTAGAGTGGCCGTTGGTGCC 245238
||| |||||||| ||| || |||| | ||||| ||| ||| ||||||||
Sbjct 109422 GGCGGTGTTGTTGAAGACGCGGAGCATAGGGGTAACACCGTTGGAGGTGCCATTGGTGCC 109481
Query 245239 CTTGATGTAGGCGCCCTTGCCCCTGAGGTTGCTGATGGACAT----GCCTAGTCCGCCGG 245294
|||||||| ||| || | | || ||| | ||||||| || | |||||||
Sbjct 109482 GGCGATGTAGGAGCCAGTGGCAC---GGATGC-GGTGGACATTTAGACCAATGCCGCCGG 109537
Query 245295 CGTGCTTGGAGATGAGGGCGCAGCTCTTGATGGTGTCTGCTATGCCCTCCATGCTGTCCG 245354
| || || || | ||||||| |||| | ||||| |||||||| || |||
Sbjct 109538 CCATTTTTGATATCATGGCGCAGGTCTTCAGAGTGTCGTAGATGCCCTCAATAGAGTCTT 109597
Query 245355 ACTTCATGTTGAGCAGAAAGCAGGAGGACAGCTGGGGCTTGGGGCTGCACGAGTTGAACA 245414
|||||||| || ||||||||||| |||||||| | || ||| | | | ||||||||
Sbjct 109598 CCTTCATGTCGACGAGAAAGCAGGACGACAGCTGTGCCTGGGGAGTACCGGCGTTGAACA 109657
Query 245415 GAGTGGGGCTGGCGTGGGTAAAGTAGCGGCTCGA 245448
||||| |||||||| ||| | ||||||
Sbjct 109658 ATGTGGGCGAAGCGTGGGTGAAGCACTTGCTCGA 109691
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 944320738168640
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