Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Colletotrichum_20gloeosporioides_20[genbank_20GCA_5F002189585.1_2020 17-06-09] 1,564 sequences; 57,603,470 total letters Query= NC_009333.1 Length=137969 Score E Sequences producing significant alignments: (Bits) Value seq1112 86.0 6e-12 >seq1112 Length=320824 Score = 86.0 bits (94), Expect = 6e-12 Identities = 119/167 (71%), Gaps = 0/167 (0%) Strand=Plus/Minus Query 20486 TGGTCAAACCCCTGGCCTGTATAGTCAGCATCCGCGTCCACGTACGCCGCCCCAAAGTGC 20545 ||||| | ||||||||||| ||||| | | ||||| ||||| |||| |||||||| Sbjct 255960 TGGTCGACGCCCTGGCCTGTGTAGTCCGTCTTTGCGTCGACGTATTCCGCGCCAAAGTGT 255901 Query 20546 CTCCACTGGAAACCGTAAACAGGTCCCAAATCCCCCTCCCTTCTGTGCGCCAGGCCGCGC 20605 | ||| ||||| || || || || || | ||| || | | ||| | |||||| Sbjct 255900 CGCCATTGGAAGCCATAGACGGGGCCGAGATCGCCGACTTCGCGGTGGGAGAGGCCGACG 255841 Query 20606 CCGGCCAGGAACTCCCTGGAGCCATTTTTGTCCCATATCTTGACTCC 20652 | | | |||||||| | |||||| || |||||| |||||||| || Sbjct 255840 CTGTCGAGGAACTCGCGGGAGCCGTTGCCGTCCCAGATCTTGACGCC 255794 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 441364171161760