Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Colletotrichum_20gloeosporioides_20[genbank_20GCA_5F002189585.1_2020
17-06-09] 1,564 sequences; 57,603,470 total letters
Query= NC_009899.1
Length=344691
Score E
Sequences producing significant alignments: (Bits) Value
seq1201 86.0 1e-11
>seq1201
Length=295393
Score = 86.0 bits (94), Expect = 1e-11
Identities = 134/189 (71%), Gaps = 2/189 (1%)
Strand=Plus/Minus
Query 243568 GGCATGAACTCTGAACTCATGGGACAGTACATCGAATTCGTAGCCGACCGCATTTTCATC 243627
||||||||||| | || ||| || |||||||| ||||| || || || | || ||
Sbjct 156380 GGCATGAACTCCAACCTGATGAAGCAATACATCGAGTTCGTCGCTGATCGTCTGTTGGTC 156321
Query 243628 GCGCTTGGTTATGAGAAAGTGTACAACTCCAAGAACCCCTTTGCCTTTATGGAGCTCATT 243687
|| || || | || || || ||||| || |||||||| | ||| |||||| |||
Sbjct 156320 GCTCTCGGCAACGACAAGGTCTACAAATCGGCCAACCCCTTCGACTTCATGGAGAACATC 156261
Query 243688 TCGCTTCAAGGGAAAACTAACTTCTTCGAAAAGCGTGTCAGTGATTATCA-ACGCCCTGG 243746
|| ||| || || || |||||||| || ||||||||| || || || | | || ||
Sbjct 156260 TCTCTTGGTGGCAAGACCAACTTCTTTGAGAAGCGTGTCGCCGACTACCAGAAGGCC-GG 156202
Query 243747 TGTGATGAA 243755
||| |||||
Sbjct 156201 TGTCATGAA 156193
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1102857899663400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |