Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Colletotrichum_20gloeosporioides_20[genbank_20GCA_5F002189585.1_2020 17-06-09] 1,564 sequences; 57,603,470 total letters Query= NC_009899.1 Length=344691 Score E Sequences producing significant alignments: (Bits) Value seq1201 86.0 1e-11 >seq1201 Length=295393 Score = 86.0 bits (94), Expect = 1e-11 Identities = 134/189 (71%), Gaps = 2/189 (1%) Strand=Plus/Minus Query 243568 GGCATGAACTCTGAACTCATGGGACAGTACATCGAATTCGTAGCCGACCGCATTTTCATC 243627 ||||||||||| | || ||| || |||||||| ||||| || || || | || || Sbjct 156380 GGCATGAACTCCAACCTGATGAAGCAATACATCGAGTTCGTCGCTGATCGTCTGTTGGTC 156321 Query 243628 GCGCTTGGTTATGAGAAAGTGTACAACTCCAAGAACCCCTTTGCCTTTATGGAGCTCATT 243687 || || || | || || || ||||| || |||||||| | ||| |||||| ||| Sbjct 156320 GCTCTCGGCAACGACAAGGTCTACAAATCGGCCAACCCCTTCGACTTCATGGAGAACATC 156261 Query 243688 TCGCTTCAAGGGAAAACTAACTTCTTCGAAAAGCGTGTCAGTGATTATCA-ACGCCCTGG 243746 || ||| || || || |||||||| || ||||||||| || || || | | || || Sbjct 156260 TCTCTTGGTGGCAAGACCAACTTCTTTGAGAAGCGTGTCGCCGACTACCAGAAGGCC-GG 156202 Query 243747 TGTGATGAA 243755 ||| ||||| Sbjct 156201 TGTCATGAA 156193 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1102857899663400