Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Colletotrichum_20gloeosporioides_20[genbank_20GCA_5F002189585.1_2020 17-06-09] 1,564 sequences; 57,603,470 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq211 208 9e-49 seq1201 132 6e-26 >seq211 Length=153984 Score = 208 bits (230), Expect = 9e-49 Identities = 898/1393 (64%), Gaps = 65/1393 (5%) Strand=Plus/Plus Query 113903 TTGACAACAACAAACTCACCCGCGAGGGTGCGTCTCAGATAGATATTGGTCGTGTATGGC 113962 |||||||| ||||||||| || | | ||| | | | ||||| |||| ||||| ||| Sbjct 108355 TTGACAACCTGAAACTCACCAGCCAAGACGCGACGCTGGTAGATGTTGGAGGTGTAAGGC 108414 Query 113963 TCAAAGCACTCATTGTTACCCAAGATTTGGGCGGTGGAGGCTGTGGGCATGGGTGCCATG 114022 |||||||| || ||||| |||| || |||| || ||| || |||||||| || | | Sbjct 108415 TCAAAGCATTCGTTGTTGCCCAGAATCTGGGAAGTACTGGCGGTTGGCATGGGGGCGACG 108474 Query 114023 AGAAGGCTGTTACGGAGACCCTTTTCCCTAATGCGTTCCTTGAGGGCGTCCCAGTC---- 114078 || | ||||||||| | ||| | | | | || |||||||||| | |||||||| Sbjct 108475 AGCAAGCTGTTACGCACACCATGCTGCTTGATCTGTTCCTTGAGAGAATCCCAGTCCCAG 108534 Query 114079 --GTAGTTGAGCTTTGTCTCCCCCTGCCACATATCAAACTGGAGGATACCTTGGGAGGCT 114136 || | | || ||| |||| |||||| ||| | || |||| || || ||| || Sbjct 108535 AGGTCGGAGGGC-TTGACTCC-----CCACATGTCATATTGAAGGACGCCCTGTGAGACT 108588 Query 114137 GGCGATCCCTCAAATGTCTCGTATGGGCCCTCAACCTCCGCCAATTCGGAGCTCGCCT-- 114194 || || || ||| | | | || | |||||| ||| || | | | || | | Sbjct 108589 GGGGAGCCTTCATAAGACGAATAGGTGCCCTCCTCCTTGGCTA--GCTGCACTGACATGG 108646 Query 114195 CGAGGGCTGCGTGATACATTGTCTCAAAAATGCGAGCATTCATTGCCTTGGCCTCGTCGG 114254 ||| || ||||| || || ||||| || || |||| | | ||||| | Sbjct 108647 TGAGAGCAGCGTGGTAGATGGTCTCGAAGATCTTCTTGTTCAGTTCACGAGCCTCAGGCG 108706 Query 114255 AATCAAACGCGAGTCGGCACAAA---ATAAATACATCCGCGAGACCTTGGACACCGAGGC 114311 | || |||| ||||| |||| | ||| |||| || ||||| ||||||||||||| Sbjct 108707 ACTCGAACGGCAGTCG---CAAAGCCAAGAATGCATCAGCAAGACCCTGGACACCGAGGC 108763 Query 114312 CAATTGGGCGATGTCTCATATTAGACTTTCGAGCGGTCTCC---ACGGGATAAAAATTCC 114368 |||| || ||||| | ||| || || ||||| |||| |||||||| || Sbjct 108764 CAATGGGCCGATGGCGCATGTTGCTGTTGCGAGC---CTCCGGGACGGGATAGTGGTTGA 108820 Query 114369 TATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATGAAGCTTTTCGT 114428 ||||| | |||||| || || ||||||| |||| || || ||||| | | Sbjct 108821 CGTCGATGATCCTATTCAGGTTGCGAACAACAACCTGGGTGACATCGTGTAGCTTCTGGA 108880 Query 114429 AATCAAAACTGCGAGTCTCT-TCATTGACATACTTAGGAAGGGCGATTGACGCCAGATTA 114487 | ||| | | | ||| || | || || | ||| || || | ||||||| || Sbjct 108881 AGTCATAGATTC-CGTCGCTGTAGTTCACGAAAGAAGGGAGAGCAAGGGACGCCAAGTTG 108939 Query 114488 CACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTACACAAATTTGAACTC 114547 || || | | ||| || | | |||||| || |||||||| || | || || || Sbjct 108940 CAGACGGCGACCTCGTCAGGGGCCGAGTACTCAATGATTTCCGTGCAAAGGTTGGAGCTT 108999 Query 114548 TTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTT-ACACGCATCCTTGTAAAGCAT 114606 ||||||||| | ||||| || || ||| ||| || | ||||||||| ||||| Sbjct 109000 CGAATGGTGCCGAGATTCTTCTGGTTGCTCTTGCGGTTGGCATG-ATCCTTGTAGAGCAT 109058 Query 114607 GTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCAGA-CATCGGCGGCTG 114665 | | || | || ||||| || |||| || |||||| || | ||||| | || | ||| Sbjct 109059 GAAAGGGTTGCCGGTCTCAGTCTGGGCCTCGAGAATGGCATACCAGAGCTTCTG-GGCCT 109117 Query 114666 GCACAGTGGCGTTGGCTCGCCCCT--CCT----CCTCGTACTTTGTGTAGAGGGCTTCAA 114719 || ||| || ||| |||| ||| ||||||||| ||| | |||||| | Sbjct 109118 TCA---TGGTCTT---TCGACCCTTGCCTTCGCGCTCGTACTTCTCGTACAAGGCTTCGA 109171 Query 114720 ACTCTTCACCCACGGCCTCTGAGAGCCCTGGTGCCTTATCTGGGCAGAAGAGAGACCATT 114779 | || || || | || | || || || || | || || | || | ||| | Sbjct 109172 ATTCCTCGCCATAGCAGTCGGCAAGACCCGGGCACTCGTTGGGACACATCAGTGTCCAGT 109231 Query 114780 GACCACCCTCCTCAACACGCTTCATGAAGAGGTCTGGGATCCAGAGAGCTGAGAAGAGAT 114839 ||| || ||| || |||||||||||||| || |||||||| || || ||| || | Sbjct 109232 CACCGTTCTTCTCCACTCGCTTCATGAAGAGATCAGGGATCCAAAGGGCGAGGAAAAGGT 109291 Query 114840 CCCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAAAGTCCATGATAT 114899 | || || | || || | || || || || | |||||||| || | || | Sbjct 109292 CACGGGCACGGACCTCCTCCTTGCCGTGGTTCTTGCGGAGGTCCAAAAACTCGAAGACGT 109351 Query 114900 CCGCGTGCCACGGTTCCAGGTACACCGCGATTG-AC-----CCCTTACGACGACCAGCCT 114953 | || ||||| || || ||||| | || | | || | ||| | | ||| ||| Sbjct 109352 CGGCATGCCAGGGCTCGAGGTAGATGGCAAAGGCACCGGGGCGCTT--GTTG-CCACCCT 109408 Query 114954 GGTTTACATACCTCGCTGTGGCATTAAATACGCGAAGCATTGGAATGATACCATCAGATT 115013 ||| ||||| | || ||| || || ||||| ||||| || | | ||| | || Sbjct 109409 GGTCGACATAGCGGGCGGTGTTGTTGAAGACGCGGAGCATAGGGGTAACACCGTTGGAGG 109468 Query 115014 GGCCATTTGT-CCCCCGA-ATACGAGACTTATTGGCTCTGACATCATGGATGTGCATACC 115071 |||||| || || ||| || ||| | | |||| | || |||| | | ||| Sbjct 109469 TGCCATTGGTGCCGGCGATGTAGGAGCC--AGTGGCACGGATGCGGTGGACATTTAGACC 109526 Query 115072 AATACCCCCTGCCCACTTTGAGATTTGCGCGCACTCCGTGAGACTGCCGTAGATCCCGTC 115131 ||| || || ||| ||||| || ||||| | | ||| || ||||||| || || Sbjct 109527 AATGCCGCCGGCCATTTTTGATATCATGGCGCAGGTCTTCAGAGTGTCGTAGATGCCCTC 109586 Query 115132 GATCGAGTCACCCTTATTTGCGATAAGGAAGCAGCTCGACATTTGTGGCCTTGGTGTACC 115191 || ||||| |||| | ||| || |||||| ||||| |||| | || ||||| Sbjct 109587 AATAGAGTCTTCCTTCATGTCGACGAGAAAGCAGGACGACAGCTGTGCCTGGGGAGTACC 109646 Query 115192 AGCGTTGAAGAGGGTTGGTGTCGCGTGGATGAA-CATACCTTG--GGACATCTTATCGTA 115248 |||||||| | || || | |||||| |||| || |||| |||||| | ||| Sbjct 109647 GGCGTTGAACAATGTGGGCGAAGCGTGGGTGAAGCA---CTTGCTCGACATCAAGTTGTA 109703 Query 115249 GGTCTCCAAGACG 115261 ||||| | |||| Sbjct 109704 TGTCTCAATGACG 109716 >seq1201 Length=295393 Score = 132 bits (146), Expect = 6e-26 Identities = 346/523 (66%), Gaps = 11/523 (2%) Strand=Plus/Plus Query 126046 GGCAAACTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGTCC 126105 |||||| || |||||||||||| |||||||||||||| || || |||||| || || Sbjct 156501 GGCAAAGTCGGTGTGGAGACCCTCATCACGGGAGATGAGCTCGTTGGAGAAGGTTAGACC 156560 Query 126106 TGGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAACCCGAGAAGAAGAT 126165 ||||||||||| |||||||| | |||||| || | || | ||| ||||||||| Sbjct 156561 GGGCATGAGACCACGCTTCTTGAGCCAGAAGATGGAGGCGAAAGCACCGCTGAAGAAGAT 156620 Query 126166 TCCCTCCACACACGCGAACGCAAAGAGACGCTCAGCAAAGGAGCGCGACTTTGTGTC--- 126222 ||||| || || || |||| ||| |||| || |||| | ||||||||||| Sbjct 156621 GCCCTCGACGGCGGCAAAGGCAACGAGGCGCTGGGCGAAGGTG---GACTTTGTGTCCGT 156677 Query 126223 AAACCACTTCATCGCCCACTGCGCCTTTTTCTCGATACACGGGACGGTCTGGATCGCTTC 126282 | ||| || ||||| | ||||| || ||| || |||| ||| | ||| || | Sbjct 156678 GATCCAGCGCAAGGCCCAGTCAGCCTTCTTACGGATGCAGGGGATGGTGTCGATGGCGTT 156737 Query 126283 AAAGAGTTCCTTCTTTTCTGATGGATCTTTGATGTACTTATCTATGAGTTTTGAATATGT 126342 ||||| | | | | || || || ||||| | || ||||| || || || Sbjct 156738 GAAGAGATAGGTACGCTGGGCAGGCTCCTTAATGTAGGTGTCGATGAGAAGGGAGTAAGT 156797 Query 126343 TTCGCCGTGGACCAT-TTCATTATGGCACTGATACGCGTAGAAAGAGCGCGCTTCGCTTA 126401 ||| ||| | | | ||| || | ||| | ||||||| ||||||| ||| | Sbjct 156798 CTCGGAGTGAATGTTCTCCATCAT-GATCTGGAAGCCGTAGAAGCAGCGCGCCTCGGGGA 156856 Query 126402 TCTGTACCTCATCGGCAAAATTGTTATTGATATTCTCAAAAACAATTCCATCGGACCCAG 126461 ||| || || | | ||| | | | |||||| || || || ||||| | | Sbjct 156857 CCTGGACTTCGCCAGAGAAACGCTCAACCAGGTTCTCATTGACGATGCCGTCGGAAGCGG 156916 Query 126462 CAAAAAACGCCAGGATATACTTTATGAATTTCTGTTCATTCTCGT---TCAGGGTCTTCC 126518 | || || || || || | ||||| | || |||| |||| || | | |||| Sbjct 156917 CGAAGAAGGCGAGAATGTGAGAGATGAAGTACTTCTCATCATCGTTGATCTTGTTGTTCC 156976 Query 126519 AGTCGTCAAGATCCTTCGAGAGATCTACCTCCTCCGCAGTCCA 126561 |||||| |||||||| || | ||| | |||||| |||||||| Sbjct 156977 AGTCGTGGAGATCCTTGGACAAATCAATCTCCTCAGCAGTCCA 157019 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 597341921737120