Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Colletotrichum_20gloeosporioides_20[genbank_20GCA_5F002189585.1_2020
17-06-09] 1,564 sequences; 57,603,470 total letters
Query= NC_011183.1
Length=154641
Score E
Sequences producing significant alignments: (Bits) Value
seq211 282 4e-71
>seq211
Length=153984
Score = 282 bits (312), Expect = 4e-71
Identities = 1082/1676 (65%), Gaps = 66/1676 (4%)
Strand=Plus/Minus
Query 93715 AATTACGATTACTTTGCCTTCAAAACTCTGGAGAAGTCGTACCTCCTCAAGATGGATGGC 93774
|| ||| | ||||| | ||| || || |||||| || || || |||||| | ||||||
Sbjct 109847 AACTACCAATACTTCGGCTTTAAGACCTTGGAGAGATCCTATCTTCTCAAGCTTGATGGC 109788
Query 93775 AGGGTTTCCGAGCGACCGCACCAGCTGCTGATGCGCGTCGCCATCGGGATTCACGGCCAC 93834
| | || ||||| |||| || || || | |||||||| ||| | || || ||| ||
Sbjct 109787 AAGATTGCCGAGAGACCACAGCACATGATCATGCGCGTTGCCGTTGGCATCTGGGGCGAC 109728
Query 93835 GACATGCCGAATGTTTTGCGGG-CTTTCAGAGACA--------TGCGGGACAAGAGGTAT 93885
|| |||| ||| | | || ||| | | || | |||| | |
Sbjct 109727 GA---------TGTTGAGCGCGTCATTGAGACATACAACTTGATGTCGAGCAAGTGCTTC 109677
Query 93886 ACCATGGCCACCCCGACCCTGTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGT 93945
||| || | || || |||||||||| || || || | ||||| |||| || ||
Sbjct 109676 ACCCACGCTTCGCCCACATTGTTCAACGCCGGTACTCCCCAGGCACAGCTGTCGTCCTGC 109617
Query 93946 TTCCTGAT-GACGAACAAGGCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTG 94004
|| || | ||| | |||| ||||| || || || | ||||| || ||| |||
Sbjct 109616 TTTCTCGTCGAC-ATGAAGGAAGACTCTATTGAGGGCATCTACGACACTCTGAAGACCTG 109558
Query 94005 TGCGACCATCTCAAAATACGCGGGGGGAATCGGGATCAGTGTCCACGACGTACGTGCCAG 94064
|| | || |||||| || || || || || | | ||||||| | | |||||||
Sbjct 109557 CGCCATGATATCAAAAATGGCCGGCGGCATTGGTCTAAATGTCCACCGCATCCGTGCCAC 109498
Query 94065 GGGTTCCTACATCCGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGT 94124
|| ||||||||| ||| |||||||||||||||||||| | |||||||||||| ||
Sbjct 109497 TGGCTCCTACATCGCCGGCACCAATGGCACCTCCAACGGTGTTACCCCTATGCTCCGCGT 109438
Query 94125 CTTCAACAACGCGGCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGC 94184
|||||||||| | || ||||| || ||||||||||| | | | ||| | || ||
Sbjct 109437 CTTCAACAACACCGCCCGCTATGTCGACCAGGGTGGCAACAAGCGCCCCGGTGCCTTTGC 109378
Query 94185 GGTCTATCTCGAGCCCTGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCA 94244
|||| |||||||||||||| || ||||| | || | ||||| || ||||||||
Sbjct 109377 CATCTACCTCGAGCCCTGGCATGCCGACGTCTTCGAGTTTTTGGACCTCCGCAAGAACCA 109318
Query 94245 CGGCAACGATCTGGAGAGGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTT 94304
|||||| || || | ||| | ||||| ||| ||| || ||| | || || || ||
Sbjct 109317 CGGCAAGGAGGAGGTCCGTGCCCGTGACCTTTTCCTCGCCCTTTGGATCCCTGATCTCTT 109258
Query 94305 TATGAAACGCGTCGAGAAAAACTCCGCCTGGAGTCTTTTTTGTCCCAATGAATGTCCCGG 94364
||||| || || ||||| ||| | ||||| || | |||||||| || || || ||
Sbjct 109257 CATGAAGCGAGTGGAGAAGAACGGTGACTGGACACTGATGTGTCCCAACGAGTGCCCGGG 109198
Query 94365 ACTGTCCGACGTTTGTGGATCGCGTTTTGAAGACTTGTATGCTCGTTACGAATCGC-AGG 94423
|| ||||| | ||| | || |||| |||||| | |||| | ||| | |
Sbjct 109197 TCTTGCCGACTGCTATGGCGAGGAATTCGAAGCCTTGTACGAGAAGTACG-AGCGCGAAG 109139
Query 94424 GCAAGGCCAGGAAGGTTATGGATGCTAGGAAGCTGTGGGATCAGATCGTGGACGTACAGG 94483
|||||| | ||| ||| | || |||||| ||| || || | || | |||
Sbjct 109138 GCAAGGGTCGAAAGACCATGAAGGCCCAGAAGCTCTGGTATGCCATTCTCGAGGCCCAGA 109079
Query 94484 TGGAGACGGGTACGCCCTACATCTTGTTCAAGGACTCTGTCAACGCCAAGTCCAACCAGC 94543
||||| || | || | ||| | | |||||| || |||| |||| |||||||
Sbjct 109078 CTGAGACCGGCAACCCTTTCATGCTCTACAAGGATCATGCCAACCGCAAGAGCAACCAGA 109019
Query 94544 AGCACCTCGGGGTGATCAAGAGCTCGAATCTGTGCACCGAGATTGTCGAGTATACTTCTC 94603
|| | ||||| || ||||| || || ||||| || || | ||||| | | |
Sbjct 109018 AGAATCTCGGCACCATTCGAAGCTCCAACCTTTGCACGGAAATCATTGAGTACTCGGCCC 108959
Query 94604 CGGACGAGATTGCTGTGTGTAACCTGGGCTCCATCAACCTGTCCACTTTCGTGCGAGATG 94663
| |||||| | || || || ||| ||| ||| | || | ||||||||
Sbjct 108958 CTGACGAGGTCGCCGTCTGCAACTTGGCGTCCCTTGCTCTCCCTTCTTTCGTG------A 108905
Query 94664 CCTACACGTCTACTGCTTCGTTCGATCTGGAGGAGCTTGTGAACTTCGCGGGAAGGATGG 94723
||||| | || | || | || | || |||| | || | ||| ||
Sbjct 108904 ACTACA--GCGACGGAATC-TATGACTTCCAGAAGCTACACGATGTCAC--CCAGGTTGT 108850
Query 94724 TCTT--GAACCTGAACAGGGTAATCGACAAGAACTTCTACCCCGTCCCGGAGGCGGAGAA 94781
| || |||||||| ||| | |||||| ||| ||| |||||||||||||| ||
Sbjct 108849 TGTTCGCAACCTGAATAGGATCATCGACGTCAACCACTATCCCGTCCCGGAGGCTCGCAA 108790
Query 94782 CTCAAACCTGAAGCATCGGCCCATCGGCATCGGCGTCCAGGGTTTCGCGGACGCGCTGGT 94841
| ||| || ||||||||||| ||| |||| ||||||||| | || || || | |
Sbjct 108789 CAGCAACATGCGCCATCGGCCCATTGGCCTCGGTGTCCAGGGTCTTGCTGATGCATTCTT 108730
Query 94842 GATGATGCGTCTGCCCTACGACTCTGTCGAC-GCGGCGGGT---TTGAATTTGAACATAT 94897
| |||| ||||| | ||| |||| | | ||| || |||| ||| || |
Sbjct 108729 GGCTTTGCGACTGCCGTTCGA----GTCGCCTGAGGCTCGTGAACTGAACAAGAAGATCT 108674
Query 94898 TCGAAAGCATTTATTACGGGGCCATGAAACAATCCGTCCACTTGGCCAGATCGGACGGCG 94957
|||| | ||| || ||| || | | || || || | |||| ||| || |
Sbjct 108673 TCGAGACCATCTACCACGCTGCTCTCACCATGTCAGTGCAGCTAGCCA---AGGA-GGAG 108618
Query 94958 GGCCACACGAATCG--TTCCG-CGGATCGCCCTTGGAACAGGGCATTTTTCAGTTCGACC 95014
|| ||| | | ||| || | || || || | ||||||| | |||| | |||
Sbjct 108617 GG-CAC-CTATTCGTCTTATGAAGGCTCCCCAGTCTCACAGGGCGTCCTTCAATATGACA 108560
Query 95015 TCTGGGGTGTGAAGCCCTCGGGTCTGTACGACTGGGAAGCTCT--ACGCGCTGATGTTAT 95072
| ||||| || |||||||| | || | |||||||| |||| | | | || | |
Sbjct 108559 TGTGGGGAGTCAAGCCCTCCGACCTCTGGGACTGGGATTCTCTCAAGGAACAGA--TCAA 108502
Query 95073 CAAACACGGTGTGAAAAACGCGCTGCTTGTGGCCCCCATGCCCACGGCCTCCACGGCGCA 95132
| || |||||| ||| |||| || ||||||||||| || ||| || | ||
Sbjct 108501 GCAGCATGGTGTGCGTAACAGCTTGCTCGTCGCCCCCATGCCAACCGCCAGTACTTCCCA 108442
Query 95133 GATCCTTGGCAACAACGAGTCGTTCGAACCCTTCACCTCCAACGTGTACAACAGGCGGGT 95192
||| || ||||||||||| | || || || | |||||||||| | ||| | | || ||
Sbjct 108441 GATTCTGGGCAACAACGAATGCTTTGAGCCTTACACCTCCAACATCTACCAGCGTCGCGT 108382
Query 95193 GCTCGCCGGGGAATTCCCCGTCATCAACAAGCACCTCCTACGGGACCT-GACGTCTCTGG 95251
| || || || || | || ||||| ||||| |||||| | || | |||
Sbjct 108381 CTTGGCTGGTGAGTTTCAGGTTGTCAACCCTTGGCTCCTCAAGGACCTCGTCGAC-ATGG 108323
Query 95252 GTGTGTGGGGTGACAAGGTCAAGAACC----AACTGCTACGCGCCAACGGCTCCGTCCAG 95307
| ||||| ||| | ||||||| | |||| | || |||||||| |||
Sbjct 108322 GCTTGTGGTCTGATGCCATGAAGAACCGCATTATTGCT----GAGAATGGCTCCGTGCAG 108267
Query 95308 AACATCCCGCAAATACCGGAGGACATCAAGGCGCTCTACAAGACCGTGTGGGAGAT 95363
||||| || | || || | || ||||||| || ||||| ||||| ||||| ||
Sbjct 108266 AACATTCCCAACATTCCCGCCGAGGTCAAGGCCCTGTACAAAACCGTCTGGGAAAT 108211
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 494713528161440
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |