Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Colletotrichum_20gloeosporioides_20[genbank_20GCA_5F002189585.1_2020
17-06-09] 1,564 sequences; 57,603,470 total letters
Query= NC_013085.1
Length=194454
Score E
Sequences producing significant alignments: (Bits) Value
seq456 132 6e-26
>seq456
Length=562
Score = 132 bits (146), Expect = 6e-26
Identities = 187/262 (71%), Gaps = 3/262 (1%)
Strand=Plus/Minus
Query 10210 AGTTCATCCTCTTTGTCAATCTCAACCACACAATCGCTCGTGGGATAAGAAACACAGGTC 10269
||||| || || |||| | |||||| ||| ||| | | ||||||| |||||| ||
Sbjct 504 AGTTCTTCTTCCTTGTGAGTCTCAATAACAACATCAGACTTAGGATAAGCAACACAAGTA 445
Query 10270 AGAAGGAAACCAGCATCGATCTGGTCATCATCAAGGAACGATTGATCGCTTTGATCTACC 10329
|||| |||||| | || |||||||||||||||||||| || ||| |||||| ||
Sbjct 444 AGAACAAAACCACCTTCAATCTGGTCATCATCAAGGAAAGAACCATCAGATTGATCAACT 385
Query 10330 GTACCCGAGATGAGTTTGCCTGCACAACTCGAACAGGCACCAGCTCGGCACGAGTAGTTG 10389
|||| | | ||| || ||||| ||||| | |||||||| ||| ||||| |
Sbjct 384 TCACCCCCAACAACTTTACCAGCACATGAAGAACAAGAACCAGCTCTGCATGAGTAAGGG 325
Query 10390 AGGTCAATGCCTGCTTCTTCAGCAGCATCCAGAATGTACTGATCGTCAGCACACTCAAAA 10449
|| ||||| || ||||||||||| || |||||||| ||| || | ||| |||||
Sbjct 324 AGATCAATTCCAACTTCTTCAGCATGGTCAAGAATGTAAACATCATCTGGACATTCAAA- 266
Query 10450 GTAGTTTCAGTTCCATCGGGTG 10471
|| ||||||||| ||||
Sbjct 265 --CTCTTGAGTTCCATCTGGTG 246
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 622112637460160
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |