Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Colletotrichum_20gloeosporioides_20[genbank_20GCA_5F002189585.1_2020 17-06-09] 1,564 sequences; 57,603,470 total letters Query= NC_013085.1 Length=194454 Score E Sequences producing significant alignments: (Bits) Value seq456 132 6e-26 >seq456 Length=562 Score = 132 bits (146), Expect = 6e-26 Identities = 187/262 (71%), Gaps = 3/262 (1%) Strand=Plus/Minus Query 10210 AGTTCATCCTCTTTGTCAATCTCAACCACACAATCGCTCGTGGGATAAGAAACACAGGTC 10269 ||||| || || |||| | |||||| ||| ||| | | ||||||| |||||| || Sbjct 504 AGTTCTTCTTCCTTGTGAGTCTCAATAACAACATCAGACTTAGGATAAGCAACACAAGTA 445 Query 10270 AGAAGGAAACCAGCATCGATCTGGTCATCATCAAGGAACGATTGATCGCTTTGATCTACC 10329 |||| |||||| | || |||||||||||||||||||| || ||| |||||| || Sbjct 444 AGAACAAAACCACCTTCAATCTGGTCATCATCAAGGAAAGAACCATCAGATTGATCAACT 385 Query 10330 GTACCCGAGATGAGTTTGCCTGCACAACTCGAACAGGCACCAGCTCGGCACGAGTAGTTG 10389 |||| | | ||| || ||||| ||||| | |||||||| ||| ||||| | Sbjct 384 TCACCCCCAACAACTTTACCAGCACATGAAGAACAAGAACCAGCTCTGCATGAGTAAGGG 325 Query 10390 AGGTCAATGCCTGCTTCTTCAGCAGCATCCAGAATGTACTGATCGTCAGCACACTCAAAA 10449 || ||||| || ||||||||||| || |||||||| ||| || | ||| ||||| Sbjct 324 AGATCAATTCCAACTTCTTCAGCATGGTCAAGAATGTAAACATCATCTGGACATTCAAA- 266 Query 10450 GTAGTTTCAGTTCCATCGGGTG 10471 || ||||||||| |||| Sbjct 265 --CTCTTGAGTTCCATCTGGTG 246 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 622112637460160