Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Colletotrichum_20gloeosporioides_20[genbank_20GCA_5F002189585.1_2020
17-06-09] 1,564 sequences; 57,603,470 total letters
Query= NC_013668.3
Length=248526
Score E
Sequences producing significant alignments: (Bits) Value
seq1201 168 1e-36
seq211 109 9e-19
>seq1201
Length=295393
Score = 168 bits (186), Expect = 1e-36
Identities = 359/531 (68%), Gaps = 4/531 (1%)
Strand=Plus/Plus
Query 159915 ACAGGAGGCACGCAAAGTCGCAGTGCAGTCCCTCGTCCCGAGAGATGAACTCGTTGGACA 159974
|||| ||||| ||||||||| ||| || ||||| || || ||||||| ||||||||| |
Sbjct 156491 ACAGAAGGCAGGCAAAGTCGGTGTGGAGACCCTCATCACGGGAGATGAGCTCGTTGGAGA 156550
Query 159975 TGATGAGGCCCGGCATGATCCCACGCGGTTTGAGCCAAAAAATGGCCGCAAAAGCACCGC 160034
| | || || ||||||| |||||| |||||||| || |||| || ||||||||||
Sbjct 156551 AGGTTAGACCGGGCATGAGACCACGCTTCTTGAGCCAGAAGATGGAGGCGAAAGCACCGC 156610
Query 160035 TAAAAAAGATCCCCTCCACGGCCGCAAACGCCACGAGCCTCTCACCAAAAGAGGCGTTGG 160094
| || ||||| ||||| ||||| ||||| || ||||| | || | || | || || |
Sbjct 156611 TGAAGAAGATGCCCTCGACGGCGGCAAAGGCAACGAGGCGCTGGGCGAAGGTGGACTTTG 156670
Query 160095 TGTCATGGGTCCACCTTTTGGCCCATTCAGCCTTCTTTGCGATGCACGGCATGCGCTCGA 160154
|||| | |||| | |||||| ||||||||||| |||||| || ||| ||||
Sbjct 156671 TGTCCGTGATCCAGCGCAAGGCCCAGTCAGCCTTCTTACGGATGCAGGGGATGGTGTCGA 156730
Query 160155 CGGCGTTAAACA-ATCTGTCCTGCTCCTTCACATCCTTGATCAGAGTAGCAATCAGCTTC 160213
|||||| || | || || | ||| ||||| || || | || ||
Sbjct 156731 TGGCGTTGAAGAGATAGGTAC-GCTGGGCAGGCTCCTTAATGTAGGTGTCGATGAGAAGG 156789
Query 160214 GAGTACATTTCTGCGTGCACATTTTCGATGGCCATCTGAAAGTTGTAGAAATATGTCGCC 160273
||||| | || | ||| | || || || ||||| ||| |||||| | ||||
Sbjct 156790 GAGTAAGTCTCGGAGTGAATGTTCTCCATCATGATCTGGAAGCCGTAGAAGCAGCGCGCC 156849
Query 160274 TCCAGATACTGCACCTCCTGTGTGAACCTTTGACCCAGATTGGCATTAACCAACCCGTCG 160333
|| | ||| || || | ||| | | | |||| || |||| || | ||||||
Sbjct 156850 TCGGGGACCTGGACTTCGCCAGAGAAACGCTCAACCAGGTTCTCATTGACGATGCCGTCG 156909
Query 160334 GCGGCCGCAAAGAAAGCCAACACGTGAGAGATGAAATGTCTCTCGTCTTTGTTGAGTCTC 160393
| || || ||||| || | | |||||||||||| | |||| || | ||||| |
Sbjct 156910 GAAGCGGCGAAGAAGGCGAGAATGTGAGAGATGAAGTACTTCTCATCATCGTTGATCTTG 156969
Query 160394 TTTTCCCAGT-GTGTCACGTCTTGGGCCAAATCAACCTCTTCCGCGCTCCA 160443
|| | ||||| ||| | || | || |||||||| ||| || || ||||
Sbjct 156970 TTGTTCCAGTCGTG-GAGATCCTTGGACAAATCAATCTCCTCAGCAGTCCA 157019
>seq211
Length=153984
Score = 109 bits (120), Expect = 9e-19
Identities = 387/592 (65%), Gaps = 12/592 (2%)
Strand=Plus/Plus
Query 203839 CTTGTCCACCGTGAACTGAATGGCGTTCACGGCAGGCCTGCTT-CTCAGATAGTACATGC 203897
|| ||| || || |||||||||| | | |||| | ||| | | ||| ||||||||||
Sbjct 108006 CTGGTCGACGGTAAACTGAATGGGGGCAGCAGCAG-CTTGCGTGCGCAGGTAGTACATGC 108064
Query 203898 CGGTCTTTAGGCCCTTCTGCCACCCGTACATGTGCATGGAAGACAGTTTGCTCACGTTGG 203957
||||||| || || || ||| || | |||||| || | |||| || | | |
Sbjct 108065 CGGTCTTCAGCCCTAGCTTCCAGCCTGCGAAATGCATGCTAGTGATCTTGCCCATGGTCG 108124
Query 203958 GGTCGGCCATGTGAATGTTCAGAGACTGGCTTTGGTCGATGAAAGGCGCC-CGATCTGCG 204016
|||| |||||||||||| || |||||| |||||||| ||||||||| || || |||
Sbjct 108125 GGTCTTTCATGTGAATGTTGAGGGACTGGGACTGGTCGAT-AAAGGCGCCACGGTCGGCG 108183
Query 204017 GCCATATTGATAATGGTCTTCTGCGAAATCTCCCACACCGTCTTGAACACGTCTCTGGTG 204076
||||| | | | ||| || ||||| ||||| || || ||| ||| | | || |
Sbjct 108184 GCCATCTGAACGACGGTACGTTGGGAAATTTCCCAGACGGTTTTGTACAGGGC-CTTGAC 108242
Query 204077 TGTTGAGGCACATCTT-CCCACGTCCTG-ATCGAGCCGTTGTCGGCCATCAGTCTCATCC 204134
| || | || || | || ||| | ||||| || || || || | | ||
Sbjct 108243 CTCGGCGGGA-ATGTTGGGAATGTTCTGCACGGAGCCATTCTCAGCAATAATGCGGTTCT 108301
Query 204135 TCGTCTCCTCCCCCCACATGCCCAACCTGATCAGCTCCCGCACCAGGTGGGGGTTGATGA 204194
|| | | || ||||| ||||| || || ||| | || ||||||| |
Sbjct 108302 TCATGGCATCAGACCACAAGCCCATGTCGACGAGGTCCTTGAGGAGCCAAGGGTTGACAA 108361
Query 204195 TCTGAAAGTCTCCGGACAGCACCCCTCGGGTGAACAGGTTGTTGGTGAATGGTTCGAACG 204254
|||||| || || | || || | || | | | |||| |||| | || || ||
Sbjct 108362 CCTGAAACTCACCAGCCAAGACGCGACGCTGGTAGATGTTGGAGGTGTAAGGCTCAAAGC 108421
Query 204255 CCTCGTTGTTGCCGAAAATCTGAGCGGTGCTGGCCGTGGGCATGGGAGCCAGGAGCAGGG 204314
||||||||||| | |||||| | || ||||| || |||||||| || | ||||| |
Sbjct 108422 ATTCGTTGTTGCCCAGAATCTGGGAAGTACTGGCGGTTGGCATGGGGGCGACGAGCAAGC 108481
Query 204315 AGTTGCGCACACCGTATTTTTGGACCCTGCGCTTCAGAGAGGTCCAGTCGTGCA--TCGC 204372
||| |||||||| | | | || | ||| ||||| |||||| | |||
Sbjct 108482 TGTTACGCACACCATGCTGCTTGATCTGTTCCTTGAGAGAATCCCAGTCCCAGAGGTCGG 108541
Query 204373 ACTGGGTTTCACGCCCCACATGTCGAACTGAAAGATGCCTTGACTGACTGGG 204424
| ||| || || ||||||||||| | |||| || ||| || |||||||
Sbjct 108542 A--GGGCTTGACTCCCCACATGTCATATTGAAGGACGCCCTGTGAGACTGGG 108591
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 795139654715840
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |