Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Colletotrichum_20gloeosporioides_20[genbank_20GCA_5F002189585.1_2020 17-06-09] 1,564 sequences; 57,603,470 total letters Query= NC_013797.1 Length=108592 Score E Sequences producing significant alignments: (Bits) Value seq428 93.3 3e-14 >seq428 Length=571 Score = 93.3 bits (102), Expect = 3e-14 Identities = 138/194 (71%), Gaps = 4/194 (2%) Strand=Plus/Plus Query 39528 TTCTTTTTGTATATTATAATCGGCCAAAACGCGTTCATCGTCCAATTGTTTCCCGCCAAA 39587 ||| || || ||||| ||||||||||| |||| |||| || | || || || | || Sbjct 374 TTCCTTCTGGATATTGTAATCGGCCAAGGTGCGTCCATCTTCAAGCTGCTTACCAGCGAA 433 Query 39588 AATTAAACGCTGCTGATCCGAGGGTACGCCTTCTTTGTC--GCATATTTTTTGTTTAATC 39645 ||| |||||||||||||||| || | ||||||||||| | || || | | || Sbjct 434 AATCAAACGCTGCTGATCCGGAGGGATACCTTCTTTGTCTTGAATCTTGGTCTTGACATT 493 Query 39646 GTCGCTACTGTGTCTGCGCTTTCCACGTCCAAAGTAATTGTTTTACCCGTTAAAGTTTTT 39705 |||| | ||||| ||| || || || | || || ||||| || |||| ||||| Sbjct 494 GTCG--ATGGTGTCGCTGCTCTCGACCTCGAGGGTGATGGTTTTCCCGGTTAGGGTTTTC 551 Query 39706 ACGAAGATCTGCAT 39719 ||||| |||||||| Sbjct 552 ACGAAAATCTGCAT 565 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 347362978701212