Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Colletotrichum_20gloeosporioides_20[genbank_20GCA_5F002189585.1_2020
17-06-09] 1,564 sequences; 57,603,470 total letters
Query= NC_014765.1
Length=198519
Score E
Sequences producing significant alignments: (Bits) Value
seq724 295 8e-75
seq968 174 2e-38
seq1235 131 2e-25
seq235 89.7 7e-13
>seq724
Length=526504
Score = 295 bits (326), Expect = 8e-75
Identities = 713/1077 (66%), Gaps = 8/1077 (1%)
Strand=Plus/Minus
Query 7010 TCACCCGTTAAGATGGCGGCTTGGACCGTCGCCCCGTATGCGACCGCCTCATCGGGGTTA 7069
||||| | | |||||| || ||||| | || ||||| || || ||||||||||||||
Sbjct 458911 TCACCAGACAGGATGGCAGCCTGGACAGCGGCACCGTAGGCAACAGCCTCATCGGGGTTG 458852
Query 7070 ATCGTTTTATTCAGTTCTTTACCGTTAAAATAATCCGATAACATTTGTTGAATTTTCGGG 7129
|| | || || | || || ||||| || || || || | | | || || |||
Sbjct 458851 ATGGACTTGTTGGGCTCCTTGCCGTTGAAGTAGTCGGAGATGAGCTTCTGGATGCGGGGG 458792
Query 7130 ATTCGTGTCGATCCACCGACCAAAACGATTTCATTCACTTTCGATTTATCGATCTTTGAG 7189
|| || || || || ||||||| ||||| |||| || || || |||||||| | |
Sbjct 458791 ATACGGGTGGAACCGCCGACCAGGACGATCTCATGGACGAGGGACTTGTCGATCTTGGCG 458732
Query 7190 TCTCGAAGTGTTTTTTCGACAGGTTCCATACATTTACGGAACAAGTCCATACACAGTTCC 7249
|| || || || || | || ||||| | |||| || || |||
Sbjct 458731 TCGGACAGGACGCGGTCAACGGGCTGGATGGTGGAGCGGAAGAGGTCCTGGCAGAGCTCC 458672
Query 7250 TCAAAACGTGCACGGGTAATGGATGTATAGAAATCAACGCCGTCGTATAACGAATCAATT 7309
|| ||||| ||||| || ||||| || ||||| || | || ||| | | || || ||
Sbjct 458671 TCGAAACGGGCACGAGTGATGGAGGTGTAGAAGTCGATACCCTCGAACAGGGAGTCGATC 458612
Query 7310 TCAATGGTTGTTTGTGCCGTCGAAGATAACGTTCGCTTTGCGCGCTCACACGCCGTTCGT 7369
||||||| || || || | ||| || | || ||||| || ||||| || || || ||
Sbjct 458611 TCAATGGAGGTCTGGGCGGACGAGGACAGGGTGCGCTTGGCACGCTCGCAAGCGGTGCGG 458552
Query 7370 AAACGACGAAGGGCACGCGGGTTACCGGAAATATCTTTCTTATGTTTACGTTTAAACTCT 7429
| ||| || || ||||| | ||| ||| | || ||||| || || || || |||||
Sbjct 458551 AGACGGCGGAGAGCACGAGCGTTGGAGGACAGGTCCTTCTTGTGCTTGCGCTTGAACTCG 458492
Query 7430 TCAGAGAAGTGTCGAAGGAGTCTCGAATCGAAATCTTCACCACCCAAGTGTGTATCCCCC 7489
| |||||| | ||| | ||||| || |||||||||||||| || || ||
Sbjct 458491 TTGACGAAGTGGTTGACGAGACGGTTGTCGAAGTCCTCACCACCCAAGTGGGTGTCACCA 458432
Query 7490 GCGGTCGCTTTGACTTCAAAGATACCTCCTTCAATGTTTAACAACGAAACATCAAACGTA 7549
|| || | ||||| || |||||||| | ||||| | | | || ||||| || ||
Sbjct 458431 GCAGTAGACTTGACCTCGAAGATACCCTCCTCAATAGTCAGGAGAGACACATCGAAAGTG 458372
Query 7550 CCACCACCCAGGTCAAAAATGAGTACGTTCGTATCGTCGTCTTTGTTCTTATCGAGACCG 7609
|||||||| || || || ||||| ||||| || | || ||||| || || |||
Sbjct 458371 CCACCACCGAGATCGAAGATGAGGACGTTGCGCTCACCCTCAGCCTTCTTGTCAAGGCCG 458312
Query 7610 TACGCGATAGCCGCCGCCGTTGGTTCATTAATAATACGAAGACAGTTCAGGCCAGCAATA 7669
|| ||||| || || || || || || || || ||||| || ||| ||||| |||||
Sbjct 458311 TAGGCGATGGCAGCGGCGGTAGGCTCGTTGATGATACGGAGGACGTTGAGGCCGGCAATG 458252
Query 7670 GTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAATCGTTAAAGTAGGCCGGGACCGTTACG 7729
| || || || || || || || || || ||||| |||||||| ||||| || | |
Sbjct 458251 AGACCAGCGTCCTTGGTGGCCTGACGCTGAGAGTCGTTGAAGTAGGCGGGGACGGTGATG 458192
Query 7730 ACCGCGTCCGTGACTTTCTTACCGAGATACGATTCCGCGATATCTTTCATTTTGGTAAGA 7789
|| |||| ||||| | ||| || || | || || | || ||| ||||| ||
Sbjct 458191 ACGGCGTTGGTGACCTGGCCACCAAGGTAGGCCTCAGCAGTCTCGCGCATCTTGGTGAGG 458132
Query 7790 ACCATCGATGAAATCTCTTCAGCCGCAAACTGTTTCGTTTCACCGTTAAAATCAACTTCA 7849
||||| | || ||||| || | | || || || || || || || ||||| ||
Sbjct 458131 ACCATGGCGGAGATCTCCTCGGGGGTGAAGGTCTTGGTCTCGCCCTTGAACTCAACCTCG 458072
Query 7850 ATCATGGGTTTATCCGCAGCAC-CGGGGATAACCTTATACGACCAATCTTTCATATCGTC 7908
|| | ||| || || | | | || ||||| | | | | ||||||||| |
Sbjct 458071 ATGACGGGCTT----GCTGTTCTTGTCGACGACCTTGAAGGGGAAGTGCTTCATATCGGC 458016
Query 7909 TTGGACCTGTTGGTCCGAAAACTTTCTTCCGATAAGACGCTTTGCATCAAAAACTGTGTT 7968
|| |||| ||| ||||| | || || |||||||| || || || || |||||
Sbjct 458015 CTGAACCTCAGAGTCGTTGAACTTGCGACCAATCAGACGCTTGGCGTCGAAGACGGTGTT 457956
Query 7969 TTTGGGGTTCATGGCTGTTTGGTTCTTCGCCGCGTCCCCGATAAGACGTTCATTATTTTC 8028
| |||||||||||| |||||||| || || || || || || || || | ||
Sbjct 457955 GTGGGGGTTCATGGCGACCTGGTTCTTGGCGGCATCACCAATCAGGCGCTC---GGTGTC 457899
Query 8029 CGTAAACGCGACGTACGATGGGGTCGTTCGATTCCCTTGGTCGTTCGCAATAATTTC 8085
| || ||||| || || ||||| || || || || |||||||| ||||| || ||
Sbjct 457898 GTTGAAGGCGACATAGGAAGGGGTGGTGCGGTTACCCTGGTCGTTGGCAATGATCTC 457842
>seq968
Length=375018
Score = 174 bits (192), Expect = 2e-38
Identities = 365/541 (67%), Gaps = 5/541 (1%)
Strand=Plus/Minus
Query 7243 CAGTTCCTCAAAACGTGCACGGGTAATGGATGTATAGAAATCAACGCCGTCGTATAACGA 7302
||| ||||| ||||| |||||||| || || ||| || |||| ||| | | ||
Sbjct 132026 CAGCTCCTCGAAACGAGCACGGGTGATCTGGGTGGTGAAGTCCTCGCCATCGAAGAGAGA 131967
Query 7303 ATCAATTTCAATGGTTGTTTGTGCCGTCGAAGATAACGTTCGCTTTGCGCGCTCACACGC 7362
||||| || ||||| || || || ||||| | || ||||| || ||||| || ||
Sbjct 131966 GTCAATCTCGATGGTGGTCTGGGCACCGGAAGAAAGGGTACGCTTGGCACGCTCGCAAGC 131907
Query 7363 CGTTCGTAAACGACGAAGGGCACGCGGGTTACCGGAAATATCTTTCTTATGTTTACGTTT 7422
|| || | |||||| |||||||| | || ||||| | || ||||| || || |
Sbjct 131906 AGTACGGAGACGACGGAGGGCACGGGCGTCGCCGGAGAGGTCCTTCTTGGTCTTGCGCTG 131847
Query 7423 AAACTCTTCAGAGAAGTG-TCGAAGGAGTCTCGAATCGAAATCTTCACCACCCAAGTGTG 7481
|| || | | |||| |||| | || | | ||||| || | ||||||||||| |
Sbjct 131846 GAAGTCCTTCTTGCAGTGCTCGA-GCAGGTTGGTGTCGAAGTCCTGGCCACCCAAGTGGG 131788
Query 7482 TATCCCCCGCGGTCGCTTTGACTTCAAAGATACCTCCTTCAATGTTTAACAACGAAACAT 7541
| || || ||||| || ||||| |||| ||| || | ||||| | | || ||||
Sbjct 131787 TGTCACCAGCGGTAGCCTTGACGGTGAAGACACCGCCCTGGATGTTCAGGAGGGAGACAT 131728
Query 7542 CAAACGTACCACCACCCAGGTCAAAAATGAGTACGTT---CGTATCGTCGTCTTTGTTCT 7598
| || ||||||||||||| ||| | ||||| ||||| | | | || |||
Sbjct 131727 CGAAAGTACCACCACCCAAGTCGTAGATGAGGACGTTGCGCTCCTTGCCGGACTTGCCAG 131668
Query 7599 TATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAATAATACGAAGACAGTTCA 7658
| | |||||||| || || || || || || || || || || ||||| || |||||
Sbjct 131667 CACCAAGACCGTAGGCAATGGCGGCAGCAGTGGGCTCGTTGATGATACGGAGGACGTTCA 131608
Query 7659 GGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAATCGTTAAAGTAGGCCG 7718
|||||||||| | | || || || || || || || || ||||| |||||||| |
Sbjct 131607 GGCCAGCAATGGCACCGGCGTCCTTGGTAGCCTGACGCTGGTTGTCGTTGAAGTAGGCAG 131548
Query 7719 GGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGATACGATTCCGCGATATCTTTCA 7778
|||| || | || || | | ||| ||||| |||| | | || ||||| || ||||
Sbjct 131547 GGACGGTAATAACGGCCTTCTCGACCTTCTTGCCGATCTTAGTCTCGGCGATCTCCTTCA 131488
Query 7779 T 7779
|
Sbjct 131487 T 131487
>seq1235
Length=290713
Score = 131 bits (144), Expect = 2e-25
Identities = 232/338 (69%), Gaps = 3/338 (1%)
Strand=Plus/Minus
Query 7457 TCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCT 7516
|||||||| |||||||||||||| || || || || || || || || || | |||
Sbjct 39763 TCGAAATCCTCACCACCCAAGTGGGTGTCACCAGCAGTAGCCAGAACCTCGAAAACACCC 39704
Query 7517 CCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACG 7576
| || ||| | || || ||||| || ||||||||||| ||||| | | || |
Sbjct 39703 TCGTCGATGGAAAGCAGGGAGACATCGAAGGTACCACCACCAAGGTCGTAGACAAGAATC 39644
Query 7577 TTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCA 7636
| | | || | | | |||| || |||||||| || ||||| || || || || ||
Sbjct 39643 TGCCTCTCCTTACC---GGTCTTGTCAAGACCGTAGGCAATAGCGGCGGCGGTGGGCTCG 39587
Query 7637 TTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGT 7696
|| | ||||||||| ||| || || || || || | ||||| || || || || ||
Sbjct 39586 TTGACAATACGAAGGACGTTAAGACCGGCGATGGTACCGGCATCCTTGGTGGCCTGGCGC 39527
Query 7697 TGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGA 7756
|| ||||| |||||||| || || || ||||| || | || || ||||| || ||
Sbjct 39526 TGGTTGTCGTTGAAGTAGGCAGGAACAGTGACGACGGCATGGGTAACCTTCTTGCCCAGG 39467
Query 7757 TACGATTCCGCGATATCTTTCATTTTGGTAAGAACCAT 7794
|| || || |||| || ||||| ||| |||| |||
Sbjct 39466 TAGGACTCGGCGACCTCCTTCATCTTGCCCAGAATCAT 39429
>seq235
Length=668
Score = 89.7 bits (98), Expect = 7e-13
Identities = 310/481 (64%), Gaps = 6/481 (1%)
Strand=Plus/Plus
Query 6890 TTAGATGGAATCGTCGTATTTCTCGGAATAACCGGGGTCATAATACCACCCATAGTTTCG 6949
|||| ||| || | | ||| ||| ||||| |||||||| ||| || ||||||
Sbjct 90 TTAGTTGGTATTTTAGAATTCCTCTCAATAAGTTTGGTCATAACACCTCCTGCAGTTTCT 149
Query 6950 AGTCCAAGAGACAGAGGTGTCACGTCCA---AGAGTAACAGGTCTTGAACAGATTCGTTC 7006
| ||| || |||| || | || || | | |||| || |||| || | || |
Sbjct 150 ATTCCGAGTGACAACGGAGCGACATCTACTAAAAGTA-CA--TCTTTAATTGTGTCACTA 206
Query 7007 CCTTCACCCGTTAAGATGGCGGCTTGGACCGTCGCCCCGTATGCGACCGCCTCATCGGGG 7066
||||| | ||| || || || || || | || || || || || || ||||| ||
Sbjct 207 GAGTCACCAGATAAAATAGCAGCCTGTACAGCAGCACCATAGGCCACAGCTTCATCAGGA 266
Query 7067 TTAATCGTTTTATTCAGTTCTTTACCGTTAAAATAATCCGATAACATTTGTTGAATTTTC 7126
|| | | |||||| | ||||| || || | | | || | ||||||| || |||||
Sbjct 267 TTTACTGATTTATTTAAGTCTTTTCCATTCATAAATTCTGTCAACATTTTCTGTATTTTT 326
Query 7127 GGGATTCGTGTCGATCCACCGACCAAAACGATTTCATTCACTTTCGATTTATCGATCTTT 7186
|| || | ||| || || || |||| ||||| ||||| | | |||||| || ||
Sbjct 327 GGTATCCTTGTGGAGCCTCCTACCAGAACGACCTCATTAATACTACGTTTATCCATTTTA 386
Query 7187 GAGTCTCGAAGTGTTTTTTCGACAGGTTCCATACATTTACGGAACAAGTCCATACACAGT 7246
| || || | | ||||| || ||||| | | | |||||||| ||||| |
Sbjct 387 GCATCACGTAAGGCCTTTTCTACTGGTTCTAATGTTGCTCTAAACAAGTCACCACACATT 446
Query 7247 TCCTCAAAACGTGCACGGGTAATGGATGTATAGAAATCAACGCCGTCGTATAACGAATCA 7306
|| ||||| | ||| | || || |||||||||||| || ||| | || || ||
Sbjct 447 TCTTCAAATCTTGCTCTTGTTATTTTTGTATAGAAATCTGTTCCCTCGAACAATGAGTCT 506
Query 7307 ATTTCAATGGTTGTTTGTGCCGTCGAAGATAACGTTCGCTTTGCGCGCTCACACGCCGTT 7366
||||| | | | | || | ||||| |||| ||||| | ||||| ||||||
Sbjct 507 ATTTCTACACTCGCCTCTGTACTACTTGATAATGTTCTTTTTGCTCTTTCACAAGCCGTT 566
Query 7367 C 7367
|
Sbjct 567 C 567
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 635120383153760
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