Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Colletotrichum_20gloeosporioides_20[genbank_20GCA_5F002189585.1_2020
17-06-09] 1,564 sequences; 57,603,470 total letters
Query= NC_019495.1
Length=290304
Score E
Sequences producing significant alignments: (Bits) Value
seq211 260 3e-64
seq1201 206 5e-48
>seq211
Length=153984
Score = 260 bits (288), Expect = 3e-64
Identities = 841/1286 (65%), Gaps = 61/1286 (5%)
Strand=Plus/Plus
Query 221417 GTCAGGGCAGCGTGGTAGATGGTCTCAAAGATCATCTTGTTGAGTCTCTTG-GCCTCGGG 221475
|| || |||||||||||||||||||| |||||| ||||||| ||| || | ||||| ||
Sbjct 108646 GTGAGAGCAGCGTGGTAGATGGTCTCGAAGATCTTCTTGTTCAGT-TCACGAGCCTCAGG 108704
Query 221476 AGAAGTGAAGGGCATACGCAGCATCTGAAAGACGTCGGCCAGTCCCTGTACTCCGATACC 221535
|| ||| |||| |||| | || | || || || ||||| || |||| ||
Sbjct 108705 CGACTCGAACGGCAGTCGCAAAGCCAAGAATGCATCAGCAAGACCCTGGACACCGAGGCC 108764
Query 221536 GATGGGCCTGTGTCTCCTGTTG--GAAGCGGCCGCTTCTGGCACGGGATAAAAGTTGACG 221593
||||||| || | | ||||| | ||| || || || |||||||| |||||||
Sbjct 108765 AATGGGCCGATGGCGCATGTTGCTGTTGCGA--GCCTCCGGGACGGGATAGTGGTTGACG 108822
Query 221594 TCGATCAGATTGTTGAGGTTCAGAGTGATGACTTTAACCACCTCGGTCAGCTTCTGGTGA 221653
||||| | | || ||||| || | || | || ||| |||||||||
Sbjct 108823 TCGATGATCCTATTCAGGTTGCGAACAACAACCTGGGTGACATCGTGTAGCTTCTGGAAG 108882
Query 221654 TTGAACACCAACTCGCCGCCGTCG-TGGAGGGGTTCCACAAAAGCGTTTAGGGCAACGCT 221712
| || | | |||||| || || | ||| |||| || |||| |
Sbjct 108883 T-------CA--TAGATTCCGTCGCTGTAG----TTCACGAAAGAAGGGAGAGCAAGGGA 108929
Query 221713 GGCCAGGTTACACACGGCCACCTCGTCCTTGTTGGTATACTGTATGATCTCTGTACAGAG 221772
|||| ||| || ||||| |||||||| | | |||| ||||| || || || ||
Sbjct 108930 CGCCAAGTTGCAGACGGCGACCTCGTCAGGGGCCGAGTACTCAATGATTTCCGTGCAAAG 108989
Query 221773 GTTGCTGCACTTGATGGTCCCCAGGTGATTGTGATTAGACTTGCGATTGGCAGCGTCCTT 221832
|||| || ||||| || || | || || || |||||| |||||| |||||
Sbjct 108990 GTTGGAGCTTCGAATGGTGCCGAGATTCTTCTGGTTGCTCTTGCGGTTGGCATGATCCTT 109049
Query 221833 GTAGAGCATAAAGGGACCGCCAGTCTCCAGCTGAGCCACCAGAATCTTGTCCCAGAGTTC 221892
||||||||| || || ||| ||||| ||| ||| | ||||| | |||||| |
Sbjct 109050 GTAGAGCATGAAAGGGTTGCCGGTCTCAGTCTGGGCCTCGAGAATGGCATACCAGAGCT- 109108
Query 221893 TCTGGCGCT-CACCGTCCT------CTTGACTGCACCCTCGGTCTTTTCATACCCGGTAT 221945
||||| || || ||| | |||| || | | |||| ||| || ||| || |
Sbjct 109109 TCTGGGCCTTCATGGTCTTTCGACCCTTGCCTTCGCGCTCGTACTTCTCGTACAAGGCTT 109168
Query 221946 AGAGCATGTCAAACTTTTCACCGTACGCCTCGTCCAGGCCTGGACACCTGGCGGGACACA 222005
|| | | || || || ||| | || || || ||| | ||||||||
Sbjct 109169 CGA---------ATTCCTCGCCATAGCAGTCGGCAAGACCCGGGCACTCGTTGGGACACA 109219
Query 222006 TCAGACTCCAGTGCTTGTTGTCTTTGACCCTCTGCATGAAGAGGTCCGGGATCCACAGCG 222065
|||| |||||| ||| | | || | || ||||||||| || |||||||| || |
Sbjct 109220 TCAGTGTCCAGTCACCGTTCTTCTCCACTCGCTTCATGAAGAGATCAGGGATCCAAAGGG 109279
Query 222066 CCTGAAAGAGATCTCTGGTCCGCTGCTCCTCCACGCCGTTGTTTTTCCTCAGATCCAAAA 222125
| | || || || | || || ||||||| ||||| ||| || | || |||||||
Sbjct 109280 CGAGGAAAAGGTCACGGGCACGGACCTCCTCCTTGCCGTGGTTCTTGCGGAGGTCCAAAA 109339
Query 222126 ACTCAAAAATGTCAGCGTGCCACGGCTCCAGATAGACGGCCAGAGCGCCGGGTCGCTTGT 222185
|||| || | ||| || ||||| ||||| || |||| ||| | || ||||| |||||||
Sbjct 109340 ACTCGAAGACGTCGGCATGCCAGGGCTCGAGGTAGATGGCAAAGGCACCGGGGCGCTTGT 109399
Query 222186 TGCCACCCTGATCCACCATCCTCTCCAGAG-CGTTGAAGATGCGAAGGGT--CGGTACCA 222242
|||||||||| || | ||| | | | |||||||| ||| || | |||| ||
Sbjct 109400 TGCCACCCTGGTCGA-CATAGCGGGCGGTGTTGTTGAAGACGCGGAGCATAGGGGTAACA 109458
Query 222243 GTCCGTTGGATCGACCGTTGGTGCCCTTAATGTACGCACCGCCGGCCCTCAGGTTACTGG 222302
|||||||| || |||||||| ||||| | || ||| | || | | ||
Sbjct 109459 --CCGTTGGAGGTGCCATTGGTGCCGGCGATGTAGGAGCCAGTGGCAC---GGATGC-GG 109512
Query 222303 CAGACAT----GCCGATACCACCGGCGTGTTTCGAGATCATGGCGCAGCTCTTGAGAGTG 222358
||||| || || || ||||| ||| || |||||||||||| |||| ||||||
Sbjct 109513 TGGACATTTAGACCAATGCCGCCGGCCATTTTTGATATCATGGCGCAGGTCTTCAGAGTG 109572
Query 222359 TCCATGATGCCCTCCATAGAGTCCTCCTTGACGTTCAGCAGAAAACAAGACGACATCTGA 222418
|| ||||||||| |||||||| ||||| | || | ||||| || ||||||| |||
Sbjct 109573 TCGTAGATGCCCTCAATAGAGTCTTCCTTCATGTCGACGAGAAAGCAGGACGACAGCTGT 109632
Query 222419 GATTTGGTGGAACAGGCGTTAAACAGCGTGGGACTGGCGTGTGTAAAGTAGCCCCTAGAC 222478
| | || | || |||||| |||| ||||| ||||| || ||| | || |||
Sbjct 109633 GCCTGGGGAGTACCGGCGTTGAACAATGTGGGCGAAGCGTGGGTGAAGCACTTGCTCGAC 109692
Query 222479 ATCAGATCGTACGTCTCTACGACTCTGGCGATGTTGTC-CCCGTGAATCTGC--ATGGCG 222535
|||| | ||| ||||| | ||| | | | | ||| ||| || ||| | |||
Sbjct 109693 ATCAAGTTGTATGTCTCAATGACGCGCTCAACATCGTCGCCCCAGA---TGCCAACGGCA 109749
Query 222536 CATCTCATGTACATGTACTGGGGCCTCTC--CACAGGACCCTTGGAGCTGGAGAGCAGGT 222593
| |||| ||||| ||| || ||||| || || | |||| |||| || |
Sbjct 109750 ACGCGCATGATCATGTGCTGTGGTCTCTCGGCAATCTTGCCATCAAGCTTGAGA--AGAT 109807
Query 222594 ACGATTTTTCCAGAGTCTTGAACCCAAAGTAGTTGAGGTCAAAGTCTCTGCCGTGAACCA 222653
| ||| | |||| ||||| || || ||||| | | || ||||| | | ||| ||| |
Sbjct 109808 AGGATCTCTCCAAGGTCTTAAAGCCGAAGTATTGGTAGTTGAAGTCGCGGTCGTAAACGA 109867
Query 222654 CGGCGGCGTCCAGCTCCGACTTGTGC 222679
||| | || |||||| |||||||
Sbjct 109868 TGGCAGAATCAAGCTCCTCCTTGTGC 109893
>seq1201
Length=295393
Score = 206 bits (228), Expect = 5e-48
Identities = 558/853 (65%), Gaps = 16/853 (2%)
Strand=Plus/Minus
Query 25477 ATATGGGAGATGTACAAGAAGGCTCAAAACTCAAACTGGACCGCCGAAGAGATTGATCTG 25536
|| ||| | |||||||||||||| | ||| |||||| || || ||||||||| ||
Sbjct 157055 ATTTGGCAAATGTACAAGAAGGCCGAGGCCTCTTTCTGGACTGCTGAGGAGATTGATTTG 156996
Query 25537 GCCAAGGACATGGACGGCTGGTACG-CTCTATCCA--AAGACGAGCAGCATTTTCTCAAG 25593
||||||| | ||| |||| || | ||| | | || ||| || | || ||
Sbjct 156995 TCCAAGGATCTCCACGACTGGAACAACAAGATCAACGATGATGAGAAGTACTTCATCTCT 156936
Query 25594 TACGTGTTGGCATTCTTTGCAGCCTCTGATGGTATAGTGAACGAGAATCTGTGCGAGAGA 25653
|| | | || ||||| || || || || || || || || ||||| ||| ||| |
Sbjct 156935 CACATTCTCGCCTTCTTCGCCGCTTCCGACGGCATCGTCAATGAGAACCTGGTTGAGCGT 156876
Query 25654 TTCACCAGGGAAGTGCAGTACGTGGAGGCCAAGTGTTTCTACGGTTTCCAGATGGCCATC 25713
||| | | ||||| ||| | ||||| || |||||||| |||||||| ||
Sbjct 156875 TTCTCTGGCGAAGTCCAGGTCCCCGAGGCGCGCTGCTTCTACGGCTTCCAGATCATGATG 156816
Query 25714 GAAAATGTGCACTCTGAGGTGTATGCCAAGCTTCTGATG---ACGTACATTACAGACGTC 25770
|| || | ||||| ||| || || ||||| || || ||||||| ||
Sbjct 156815 GAGAACATTCACTCCGAGACTTACTCC---CTTCTCATCGACACCTACATTAAGGAGCCT 156759
Query 25771 GCCGAGAGAGATCGGCTGTTTGGTGCCATCGAGCACATACCCAGCATCAAGAGGAAGGCG 25830
||| || | || || |||||||| ||| ||| ||||| | ||||||
Sbjct 156758 GCCCAGCGTACCTATCTCTTCAACGCCATCGACACCATCCCCTGCATCCGTAAGAAGGCT 156699
Query 25831 CGGTGGGCCATGAAGTGGATCAACAGCCAGAGCG-CTACGTTTGGCGAGCGGCTGGTAGC 25889
|||||| || ||||||| | | || | | | || || | | |||| || || ||
Sbjct 156698 GACTGGGCCTTGCGCTGGATCA-CGGACACAAAGTCCACCTTCGCCCAGCGCCTCGTTGC 156640
Query 25890 CTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGCGGCCATCTTCTGGCTCAA 25949
|||||| || || ||||||||||| ||||||||| | || || ||||||||||||||||
Sbjct 156639 CTTTGCCGCCGTCGAGGGCATCTTCTTCAGCGGTGCTTTCGCCTCCATCTTCTGGCTCAA 156580
Query 25950 GCAGAAGGGGACCATGCCCGGGCTGTACTTTTCCAACGAGCTCATCAGCAGGGACGAGGG 26009
| || || ||||||||| || ||| ||||||||||||||| | | || |||||
Sbjct 156579 GAAGCGTGGTCTCATGCCCGGTCTAACCTTCTCCAACGAGCTCATCTCCCGTGATGAGGG 156520
Query 26010 TCTCCACAGAGATTTTGCCTGCCTGCTCTACACGGGCCACTTGCTCCACAAACCTTCTCA 26069
|||||||| || ||||||||||| || ||| | ||| || ||| || ||
Sbjct 156519 TCTCCACACCGACTTTGCCTGCCTTCTGTACTC---TCACCTGAAGCAC-CGCCCCAGCA 156464
Query 26070 AG-AGACCGTCTACAGTATCATCAAAGAGGCTGTGGAGATCGAGAAGGAGTTTCNNNNNN 26128
|| || | | ||| ||| || ||||| |||||||| | ||||| |
Sbjct 156463 AGCAGGTGATTGAGGATATTATCGTCGATGCTGTCAAGATCGAGCAAGAGTTCCTGACCG 156404
Query 26129 NNNNNNNNNNNNNNNNNNNNNTGGGCATGAACAACAGACTCATGAGCCAATACATTGAGT 26188
||||||||||| || || |||| |||||||| ||||
Sbjct 156403 AGGCTCTGCCTTGCGCCCTCCTGGGCATGAACTCCAACCTGATGAAGCAATACATCGAGT 156344
Query 26189 ATGTGGCCGACCATCTGCTGTGCCAGCTGGGACTCGCCAGACTCTACAGTACGCCTAACC 26248
|| || || | |||| || | || || || || |||||| || | ||||
Sbjct 156343 TCGTCGCTGATCGTCTGTTGGTCGCTCTCGGCAACGACAAGGTCTACAAATCGGCCAACC 156284
Query 26249 CGTTCGACTTTATGGAAAACATATCGTTGGAAGGGAAGACCAACTTCTTTGAAAAGAGGG 26308
| |||||||| ||||| ||||| || | | || ||||||||||||||||| ||| | |
Sbjct 156283 CCTTCGACTTCATGGAGAACATCTCTCTTGGTGGCAAGACCAACTTCTTTGAGAAGCGTG 156224
Query 26309 TCGGCGACTATCA 26321
||| |||||| ||
Sbjct 156223 TCGCCGACTACCA 156211
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 928826641084160
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