Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Colletotrichum_20gloeosporioides_20[genbank_20GCA_5F002189585.1_2020
17-06-09] 1,564 sequences; 57,603,470 total letters
Query= NC_020837.1
Length=198013
Score E
Sequences producing significant alignments: (Bits) Value
seq456 95.1 2e-14
>seq456
Length=562
Score = 95.1 bits (104), Expect = 2e-14
Identities = 141/200 (71%), Gaps = 0/200 (0%)
Strand=Plus/Minus
Query 102809 ACCACATCCGAAGTTGGGTATGCCACGCAGGTCAGAACAAAACCTGCTTCTAGTTGATCG 102868
|| ||||| || | || || || || || || ||||||||||| |||| | || ||
Sbjct 477 ACAACATCAGACTTAGGATAAGCAACACAAGTAAGAACAAAACCACCTTCAATCTGGTCA 418
Query 102869 TCATCCAGAAAGGATTGATCTTCTTGATCTACAGTACCCGATTCAATCTTACCAGCACAA 102928
||||| || || || ||| |||||| || |||| ||| |||||||||||
Sbjct 417 TCATCAAGGAAAGAACCATCAGATTGATCAACTTCACCCCCAACAACTTTACCAGCACAT 358
Query 102929 GTAGAACACGCACCAGCACGACAGGAATAAGGCAGATCAACACCTGCTTCATCAGCAGCG 102988
| |||||| | |||||| | || || ||||| ||||||| || |||| |||||| |
Sbjct 357 GAAGAACAAGAACCAGCTCTGCATGAGTAAGGGAGATCAATTCCAACTTCTTCAGCATGG 298
Query 102989 TCTAGAATATATTGATCATC 103008
|| ||||| || ||||||
Sbjct 297 TCAAGAATGTAAACATCATC 278
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 633501214809120
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |