Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Colletotrichum_20gloeosporioides_20[genbank_20GCA_5F002189585.1_2020 17-06-09] 1,564 sequences; 57,603,470 total letters Query= NC_020837.1 Length=198013 Score E Sequences producing significant alignments: (Bits) Value seq456 95.1 2e-14 >seq456 Length=562 Score = 95.1 bits (104), Expect = 2e-14 Identities = 141/200 (71%), Gaps = 0/200 (0%) Strand=Plus/Minus Query 102809 ACCACATCCGAAGTTGGGTATGCCACGCAGGTCAGAACAAAACCTGCTTCTAGTTGATCG 102868 || ||||| || | || || || || || || ||||||||||| |||| | || || Sbjct 477 ACAACATCAGACTTAGGATAAGCAACACAAGTAAGAACAAAACCACCTTCAATCTGGTCA 418 Query 102869 TCATCCAGAAAGGATTGATCTTCTTGATCTACAGTACCCGATTCAATCTTACCAGCACAA 102928 ||||| || || || ||| |||||| || |||| ||| ||||||||||| Sbjct 417 TCATCAAGGAAAGAACCATCAGATTGATCAACTTCACCCCCAACAACTTTACCAGCACAT 358 Query 102929 GTAGAACACGCACCAGCACGACAGGAATAAGGCAGATCAACACCTGCTTCATCAGCAGCG 102988 | |||||| | |||||| | || || ||||| ||||||| || |||| |||||| | Sbjct 357 GAAGAACAAGAACCAGCTCTGCATGAGTAAGGGAGATCAATTCCAACTTCTTCAGCATGG 298 Query 102989 TCTAGAATATATTGATCATC 103008 || ||||| || |||||| Sbjct 297 TCAAGAATGTAAACATCATC 278 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 633501214809120