Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Colletotrichum_20gloeosporioides_20[genbank_20GCA_5F002189585.1_2020 17-06-09] 1,564 sequences; 57,603,470 total letters Query= NC_020851.1 Length=208007 Score E Sequences producing significant alignments: (Bits) Value seq456 116 5e-21 >seq456 Length=562 Score = 116 bits (128), Expect = 5e-21 Identities = 170/239 (71%), Gaps = 1/239 (0%) Strand=Plus/Minus Query 32609 CAGTAGAGTTTCTCTTCTTGTTCAGTTTCAATTATAACATCAGAAGTTGGATATGCAACA 32668 |||| ||||| ||||| | | ||| ||||| | ||||||||| | ||||| |||||| Sbjct 509 CAGT-GAGTTCTTCTTCCTTGTGAGTCTCAATAACAACATCAGACTTAGGATAAGCAACA 451 Query 32669 CAAGTGAGCACAAACCCTTCTTCAATTTGATCATCATCCAAGAACGACTGATCACTTTGG 32728 ||||| || ||||| || ||||||| || |||||||| | ||| || |||| ||| Sbjct 450 CAAGTAAGAACAAAACCACCTTCAATCTGGTCATCATCAAGGAAAGAACCATCAGATTGA 391 Query 32729 TCTACTGTACCAGATACAATCTTACCTGCACAAGATGAACAGGCACCTGCACGACAAGAG 32788 || ||| ||| |||| ||||| ||||| || ||||| | ||| || | || ||| Sbjct 390 TCAACTTCACCCCCAACAACTTTACCAGCACATGAAGAACAAGAACCAGCTCTGCATGAG 331 Query 32789 TAGTTTAAATCAACCCCACCTTCCTCTGCTGCATCAAGGATGTATTGATCATCAGCACA 32847 || | ||||| ||| |||| || || ||||| ||||| |||||| | ||| Sbjct 330 TAAGGGAGATCAATTCCAACTTCTTCAGCATGGTCAAGAATGTAAACATCATCTGGACA 272 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 665481389584480