Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Colletotrichum_20gloeosporioides_20[genbank_20GCA_5F002189585.1_2020 17-06-09] 1,564 sequences; 57,603,470 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq211 149 7e-31 seq1201 147 3e-30 >seq211 Length=153984 Score = 149 bits (164), Expect = 7e-31 Identities = 970/1526 (64%), Gaps = 43/1526 (3%) Strand=Plus/Minus Query 75146 TACTTTGGTCTCAAAACCCTTGAGAAGAGCTATCTTCAACGGCTCGATGGCATCCTCATG 75205 ||||| || | || ||| | |||| |||||||| ||| ||||||| | Sbjct 109838 TACTTCGGCTTTAAGACCTTGGAGAGATCCTATCTTCTCAAGCTTGATGGCAAGATTGCC 109779 Query 75206 GAAACCCCACAGTACATGTTCATGCGGGTCGCAATCGGCATCCACGGGGAAGACATTGAT 75265 || | |||||| ||||| ||||||| || || | |||||| || || || |||| Sbjct 109778 GAGAGACCACAGCACATGATCATGCGCGTTGCCGTTGGCATCTGGGGCGACGATGTTGAG 109719 Query 75266 TCTGTCTTGGAGACATACGACAAGATGTCC--CAAGGTATG-TTCATTCACGCAACACCA 75322 ||| | ||||||||| || |||||| |||| || |||| ||||| | || Sbjct 109718 CGCGTCATTGAGACATACAACTTGATGTCGAGCAAG---TGCTTCACCCACGCTTCGCCC 109662 Query 75323 ACCCTCTTCAATGCTGGTACACCAAGACCGCAGATGTCCAGTTGCTTCCTTATCGCCAAC 75382 || | ||||| || ||||| || | ||| |||| ||||| || ||| || Sbjct 109661 ACATTGTTCAACGCCGGTACTCCCCAGGCACAGCTGTCGTCCTGCTTTCTCGTCGACATG 109602 Query 75383 AAGGAGGACTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAG 75442 ||||| ||||| || | || ||||| | ||||| | | || || || ||||| Sbjct 109601 AAGGAAGACTCTATTGAGGGCATCTACGACACTCTGAAGACCTGCGCCATGATATCAAAA 109542 Query 75443 TGGGCTGGGGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTAT-TCG 75501 ||| || || ||||| | | |||| | | |||| | ||| || ||| Sbjct 109541 ATGGCCGGCGGCATTGGTCTAAATGTCCACCGCATCCGTGCCACTGG--CTCCTACATCG 109484 Query 75502 GGGG-ACAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAG 75560 || || ||||| || | ||| ||| || ||||| ||||| || ||| ||| | Sbjct 109483 CCGGCACCAATGGCACCTCCAACGGTGTTACCCCTATGCTCCGCGTCTTCAACAACACCG 109424 Query 75561 CGCGCTATGTAAATCAAGCGGGGCGTC----GCAAGGGGTCCATCGCGGTCTACTTGGAA 75616 | |||||||| | || | | ||| | || || || | || ||||| | || Sbjct 109423 CCCGCTATGTCGACCAGG-GTGGCAACAAGCGCCCCGGTGCCTTTGCCATCTACCTCGAG 109365 Query 75617 CCATGGCATGCCGATATCATGGAGTTCCTTGAGTTACGACTCAACCAAGGTGACGAAGAG 75676 || ||||||||||| || | ||||| | || | || ||||| || | || ||| Sbjct 109364 CCCTGGCATGCCGACGTCTTCGAGTTTTTGGACCTCCGCAAGAACCACGGCAAGGAGGAG 109305 Query 75677 GCTCGGTGTA-GAGATCTCTTTTCATC--CCTGTGGATTCCAGACCTTTTCATGAAGCGG 75733 | || ||| | || || |||| || ||| ||||| || || || ||||||||||| Sbjct 109304 G-TCCGTGCCCGTGACCT--TTTCCTCGCCCTTTGGATCCCTGATCTCTTCATGAAGCGA 109248 Query 75734 GTTGAGGAGGGTGGTCAATGGTCTCTTTTCTGTCCAGACAAGGCACCAGGTCTCTCCGAC 75793 || ||| || ||| | ||| | || | ||||| || || || ||||| ||||| Sbjct 109247 GTGGAGAAGAACGGTGACTGGACACTGATGTGTCCCAACGAGTGCCCGGGTCTTGCCGAC 109188 Query 75794 -GCGGTGGGTGAGGAGTTTGAAGCCCTCTACACAAAGTATGAA-GAGGAGGGTAGAGCCA 75851 || ||| ||||| || |||||| | ||| ||||| || | | ||| || | | Sbjct 109187 TGCTATGGC-GAGGAATTCGAAGCCTTGTACGAGAAGTACGAGCGCGAAGGCAAGGGTCG 109129 Query 75852 ATGCGACTGTACCAGCCGCCGATGTT-TGGAAGGCTATTCTCAAATCACAGACGGAGACT 75910 | ||| | ||| | || | | ||| | || |||||| | | ||||| ||||| Sbjct 109128 AAA-GACCATGAAGGCC-CAGAAGCTCTGGTATGCCATTCTCGAGGCCCAGACTGAGACC 109071 Query 75911 GGAACACCATATATGCTTTACAAGGATGCTTGTAACAAGAAGAGTAACCAAAAGAATTTG 75970 || | || | ||||| ||||||||| | ||| ||||| ||||| |||||| | Sbjct 109070 GGCAACCCTTTCATGCTCTACAAGGATCATGCCAACCGCAAGAGCAACCAGAAGAATCTC 109011 Query 75971 GGAACAATCAAGAGCTCAAATCTTTGCACGGAAATTTTAGAGTACACAGATAAGGATGAG 76030 || || || ||||| || |||||||||||||| | |||||| | | || ||| Sbjct 109010 GGCACCATTCGAAGCTCCAACCTTTGCACGGAAATCATTGAGTACTCGGCCCCTGACGAG 108951 Query 76031 ACGGCTGTTTGCAATTTGGCATCAATCGCCCTTCCAAAGTATGTCAATGA-AGAGACTCG 76089 || || ||||| ||||| || | || || || | || || | || ||| | Sbjct 108950 GTCGCCGTCTGCAACTTGGCGTCCCTTGCTCTCCCTTCTTTCGTGAACTACAGCGACG-G 108892 Query 76090 CACTTTTGATTATGAAAAACTTCATGAAATCACAAAGATTGTTACCAAAAATCTAAACCG 76149 | | ||| | | || || || || |||| || ||||| || || || | Sbjct 108891 AATCTATGACTTCCAGAAGCTACACGATGTCACCCAGGTTGTTGTTCGCAACCTGAATAG 108832 Query 76150 AGTCATTGACAGAAATTTTTATCCCGTT---GAGACTGCGCGAAAGTCTAATATGCGACA 76206 |||| ||| || |||||||| ||| || ||| | || || ||||| || Sbjct 108831 GATCATCGACGTCAACCACTATCCCGTCCCGGAGGCT-CGCAACAGC--AACATGCGCCA 108775 Query 76207 CAGACCTATTGGTTTGGGTGTTCAAGGTCTCGCGGATGTATTTATTT-TGTGCCGCTACG 76265 | || ||||| | ||||| || ||||| || |||| ||| | | ||| || | Sbjct 108774 TCGGCCCATTGGCCTCGGTGTCCAGGGTCTTGCTGATGCATTCTTGGCTTTGCGACTGC- 108716 Query 76266 CATTTGATTCAGATGAAGCCAAGGAGATGAATGCTCGTATCTTTGAAACCATGTATCACG 76325 | || || || ||| || || |||| ||||| || ||||| || |||| Sbjct 108715 CGTTCGAGTCGCCTGAGGCTCGTGAACTGAACAAGAAGATCTTCGAGACCATCTACCACG 108656 Query 76326 CATCCCTGGAGGCGAGTT-GTGAAT-TGGCTGAAGCCCAAGGTTCCTATGAGACATTTGA 76383 | | || | || ||| | | || | | | || ||||| | | | ||| Sbjct 108655 CTGCTCTCAC--CATGTCAGTGCAGCTAGCCAAGGAGGAGGGCACCTATTCGTCTTATGA 108598 Query 76384 GGGTTCTCCCGCGTCCCAAGGGGTGCTTCAGTTTGATATGTGGGAAGGTGAAACCAAGCT 76443 || || || | || || || || ||||| | ||| ||||||| || | || || | Sbjct 108597 AGGCTCCCCAGTCTCACAGGGCGTCCTTCAATATGACATGTGGGGAG-TCAAGCCCTCCG 108539 Query 76444 -CAACTACGACTGGGATGTTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTC 76502 | || ||||||||| ||||||||||| |||||| || | ||| | |||||||| Sbjct 108538 ACCTCTGGGACTGGGATTCTCTCAAGGAACAGATCAAGCAGCATGGTGTGCGTAACAGCT 108479 Query 76503 TTTTGATGGCACCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCT 76562 | | | || || |||||||| ||| || | || || |||| || || ||||||| Sbjct 108478 TGCTCGTCGCCCCCATGCCAACCGCCAGTACTTCCCAGATTCTGGGCAACAACGAATGCT 108419 Query 76563 TTGAACCATACACAACAAACATCTACCTGAGAAGAACCCTCGCAGGTGAGTTTGTCATTG 76622 |||| || ||||| | |||||||||| | | | | | || ||||||||| ||| Sbjct 108418 TTGAGCCTTACACCTCCAACATCTACCAGCGTCGCGTCTTGGCTGGTGAGTTTCAGGTTG 108359 Query 76623 TCAACAAGCACCTCGTCAATGACCTC 76648 ||||| ||| |||| |||||| Sbjct 108358 TCAACCCTTGGCTCCTCAAGGACCTC 108333 >seq1201 Length=295393 Score = 147 bits (162), Expect = 3e-30 Identities = 354/527 (67%), Gaps = 19/527 (4%) Strand=Plus/Minus Query 64714 TGGACTGCGGAAGAAGTTGATTTGTCCAAAGATCTTGACGACTGGAAGACCCTGA---AT 64770 |||||||| || || ||||||||||||| ||||| |||||||||| | | || | Sbjct 157019 TGGACTGCTGAGGAGATTGATTTGTCCAAGGATCTCCACGACTGGAACAACAAGATCAAC 156960 Query 64771 GAAAATGAAAAGAAATTCATAAAGTACATCCTGGCATTCTTTGCTGGGTCCGATGGAATT 64830 || |||| ||| | ||||| |||| || || ||||| || | ||||| || || Sbjct 156959 GATGATGAGAAGTACTTCATCTCTCACATTCTCGCCTTCTTCGCCGCTTCCGACGGCATC 156900 Query 64831 GTTTTTGAGAATATCAATAACAATTTTGCGGATGAAGTGCAGATAAGCGAAGCGCGCTCA 64890 || |||||| | | | ||| | | ||||| ||| | ||| ||||||| Sbjct 156899 GTCAATGAGAACCTGGTTGAGCGTTTCTCTGGCGAAGTCCAGGTCCCCGAGGCGCGCTGC 156840 Query 64891 TTCTACGCATATCAATGCCATAATGAA-ATGGTTCATGGCGAAACATATTCAAAATTGAT 64949 ||||||| | || | ||| ||| | | |||| ||| || || || | || Sbjct 156839 TTCTACGGCT-TCCAGATCATGATGGAGAACATTCACTCCGAGACTTACTCCCTTCTCAT 156781 Query 64950 TGACAAATACATTAAGGATGGATCTGAAAAGAAGCAGTTAT---TTGAA-GCCATCCAAA 65005 |||| ||||||||||| ||| || | | ||| || || |||||| | | Sbjct 156780 CGACACCTACATTAAGGAGC---CTGCCCAGC-GTACCTATCTCTTCAACGCCATCGACA 156725 Query 65006 CTGTACCATGTATTGAGAAGAAGGCGAAATGGGCAATGAAATGGTTT---GACACAAAGT 65062 | | || || || |||||||| | ||||| || ||| | |||||||||| Sbjct 156724 CCATCCCCTGCATCCGTAAGAAGGCTGACTGGGCCTTGCGCTGGATCACGGACACAAAGT 156665 Query 65063 CTCGCTCCTTCGCCGAGCGCCTTTTTGCGTTTGCGTGTGTGGAGGGTATCTTCTTCTCCG 65122 | | |||||||| ||||||| |||| ||||| || ||||| ||||||||| || Sbjct 156664 C---CACCTTCGCCCAGCGCCTCGTTGCCTTTGCCGCCGTCGAGGGCATCTTCTTCAGCG 156608 Query 65123 GGTCATTCTGCGCTATTTATTGGTTGAAGAAGCGGGGTCTCATGCCAGGCCTATGCTTCT 65182 | | ||| | | || | ||| | |||||||| ||||||||||| || ||| ||||| Sbjct 156607 GTGCTTTCGCCTCCATCTTCTGGCTCAAGAAGCGTGGTCTCATGCCCGGTCTAACCTTCT 156548 Query 65183 CAAATGAACTTATTTCCCGAGATGAGGGTCTCCACCAGGAGTTTGCC 65229 | || || || || ||||| ||||||||||||||| || |||||| Sbjct 156547 CCAACGAGCTCATCTCCCGTGATGAGGGTCTCCACACCGACTTTGCC 156501 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596557937064320