Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Colletotrichum_20gloeosporioides_20[genbank_20GCA_5F002189585.1_2020 17-06-09] 1,564 sequences; 57,603,470 total letters Query= NC_021530.1 Length=171407 Score E Sequences producing significant alignments: (Bits) Value seq456 125 8e-24 >seq456 Length=562 Score = 125 bits (138), Expect = 8e-24 Identities = 170/235 (72%), Gaps = 3/235 (1%) Strand=Plus/Plus Query 158733 AATGTGAAGAGGATCAATACATTCTAGACGCAGCAGAAGAAGCAGGAGTTGATATTAATT 158792 ||||| ||| ||| |||||||| ||| || ||||||| ||| ||||| | || Sbjct 270 AATGTCCAGATGATGTTTACATTCTTGACCATGCTGAAGAAGTTGGAATTGATCTCCCTT 329 Query 158793 ACTCTTGTCGTGCTGGTGCTTGCTCTTCATGTGCAGGTAAAATTGTATCTGGAACTGTTG 158852 |||| || | |||||| |||| ||||||||||| |||||| |||| || |||| Sbjct 330 ACTCATGCAGAGCTGGTTCTTGTTCTTCATGTGCTGGTAAAGTTGTTGGGGGTGAAGTTG 389 Query 158853 ATCAGAGTGATCAGTCGTTCTTAGACGATGATCAGATTGCAGCAGGATTTGTTCTTACGT 158912 |||| |||| || ||| | || ||||| ||||||| || || ||||||||||| | Sbjct 390 ATCAATCTGATGGTTCTTTCCTTGATGATGACCAGATTGAAGGTGGTTTTGTTCTTACTT 449 Query 158913 GTGTAGCATATCCAACATCTGATTGTGTTGTTGTTACTGATCAAG--AGGAGAAC 158965 |||| || ||||| | |||||| |||| ||| ||| | |||| || ||||| Sbjct 450 GTGTTGCTTATCCTAAGTCTGATGTTGTTATTGAGACTCA-CAAGGAAGAAGAAC 503 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 548363679280480