Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Colletotrichum_20gloeosporioides_20[genbank_20GCA_5F002189585.1_2020
17-06-09] 1,564 sequences; 57,603,470 total letters
Query= NC_021536.1
Length=171797
Score E
Sequences producing significant alignments: (Bits) Value
seq456 102 9e-17
>seq456
Length=562
Score = 102 bits (112), Expect = 9e-17
Identities = 127/174 (73%), Gaps = 0/174 (0%)
Strand=Plus/Plus
Query 152018 TGCTGAGGAACAAGGAGTTGATATGAACTACTCTTGTCGTGCTGGTGCATGTTCCTCTTG 152077
|||||| ||| ||| ||||| | ||||| || | |||||| | ||||| || ||
Sbjct 301 TGCTGAAGAAGTTGGAATTGATCTCCCTTACTCATGCAGAGCTGGTTCTTGTTCTTCATG 360
Query 152078 TGCTGGTAAGATTGTGAGTGGTACAGTTGATCAGAGTGACCAATCATTCTTGGATGATGA 152137
||||||||| |||| | ||| ||||||||| ||| || ||| | ||||||||
Sbjct 361 TGCTGGTAAAGTTGTTGGGGGTGAAGTTGATCAATCTGATGGTTCTTTCCTTGATGATGA 420
Query 152138 CCAGATTGAATCAGGATTCGTGCTGACCTGTGTTGCATATCCAACTTCTGATGT 152191
|||||||||| || || || || || |||||||| ||||| | ||||||||
Sbjct 421 CCAGATTGAAGGTGGTTTTGTTCTTACTTGTGTTGCTTATCCTAAGTCTGATGT 474
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 549611654882080
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |