Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Colletotrichum_20gloeosporioides_20[genbank_20GCA_5F002189585.1_2020 17-06-09] 1,564 sequences; 57,603,470 total letters Query= NC_021536.1 Length=171797 Score E Sequences producing significant alignments: (Bits) Value seq456 102 9e-17 >seq456 Length=562 Score = 102 bits (112), Expect = 9e-17 Identities = 127/174 (73%), Gaps = 0/174 (0%) Strand=Plus/Plus Query 152018 TGCTGAGGAACAAGGAGTTGATATGAACTACTCTTGTCGTGCTGGTGCATGTTCCTCTTG 152077 |||||| ||| ||| ||||| | ||||| || | |||||| | ||||| || || Sbjct 301 TGCTGAAGAAGTTGGAATTGATCTCCCTTACTCATGCAGAGCTGGTTCTTGTTCTTCATG 360 Query 152078 TGCTGGTAAGATTGTGAGTGGTACAGTTGATCAGAGTGACCAATCATTCTTGGATGATGA 152137 ||||||||| |||| | ||| ||||||||| ||| || ||| | |||||||| Sbjct 361 TGCTGGTAAAGTTGTTGGGGGTGAAGTTGATCAATCTGATGGTTCTTTCCTTGATGATGA 420 Query 152138 CCAGATTGAATCAGGATTCGTGCTGACCTGTGTTGCATATCCAACTTCTGATGT 152191 |||||||||| || || || || || |||||||| ||||| | |||||||| Sbjct 421 CCAGATTGAAGGTGGTTTTGTTCTTACTTGTGTTGCTTATCCTAAGTCTGATGT 474 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 549611654882080