Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Colletotrichum_20gloeosporioides_20[genbank_20GCA_5F002189585.1_2020 17-06-09] 1,564 sequences; 57,603,470 total letters Query= NC_023584.1 Length=170438 Score E Sequences producing significant alignments: (Bits) Value seq456 113 5e-20 >seq456 Length=562 Score = 113 bits (124), Expect = 5e-20 Identities = 157/218 (72%), Gaps = 3/218 (1%) Strand=Plus/Plus Query 158222 TACATTCTAGACGCAGCAGAAGAAGCAGGAGTTGATATTAACTACTCTTGTCGTGCTGGT 158281 |||||||| ||| || ||||||| ||| ||||| | ||||| || | |||||| Sbjct 287 TACATTCTTGACCATGCTGAAGAAGTTGGAATTGATCTCCCTTACTCATGCAGAGCTGGT 346 Query 158282 GCTTGCTCTTCATGTGCAGGTAAAATTGTATCTGGAACTGTTGATCAGAGTGATCAGTCG 158341 |||| ||||||||||| |||||| |||| || |||||||| |||| || Sbjct 347 TCTTGTTCTTCATGTGCTGGTAAAGTTGTTGGGGGTGAAGTTGATCAATCTGATGGTTCT 406 Query 158342 TTCCTAGACGATGATCAAATCGCAGCAGGATTTGTTCTTACGTGTGTAGCATATCCAACA 158401 ||||| || ||||| || || | || || ||||||||||| ||||| || ||||| | Sbjct 407 TTCCTTGATGATGACCAGATTGAAGGTGGTTTTGTTCTTACTTGTGTTGCTTATCCTAAG 466 Query 158402 TCTGATTGTGTTGTTGTTACTGATCAAG--AGGAGAAC 158437 |||||| |||| ||| ||| | |||| || ||||| Sbjct 467 TCTGATGTTGTTATTGAGACTCA-CAAGGAAGAAGAAC 503 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 545262939901120