Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Colletotrichum_20gloeosporioides_20[genbank_20GCA_5F002189585.1_2020 17-06-09] 1,564 sequences; 57,603,470 total letters Query= NC_023587.1 Length=189311 Score E Sequences producing significant alignments: (Bits) Value seq456 138 1e-27 >seq456 Length=562 Score = 138 bits (152), Expect = 1e-27 Identities = 174/239 (73%), Gaps = 0/239 (0%) Strand=Plus/Plus Query 138517 TTTGACTGTGCTGATGATCAGTACATCCTTGATGCTGCTGATGAAGCAGGTATTGATCTT 138576 ||||| ||| | |||||| ||||| ||||| |||||| |||| || |||||||| Sbjct 266 TTTGAATGTCCAGATGATGTTTACATTCTTGACCATGCTGAAGAAGTTGGAATTGATCTC 325 Query 138577 CCCTACTCCTGTCGTGCTGGTGCATGTTCTACCTGTGCTGGTAAATTAGTTGAAGGAACT 138636 || ||||| || | |||||| | |||||| | |||||||||||| | |||| || Sbjct 326 CCTTACTCATGCAGAGCTGGTTCTTGTTCTTCATGTGCTGGTAAAGTTGTTGGGGGTGAA 385 Query 138637 GTAGATCAGTCTGACCAGTCTTTCCTTGATGATGACCAAATTGCAGCAGGATTTATCATG 138696 || ||||| ||||| |||||||||||||||||||| |||| || || ||| | | Sbjct 386 GTTGATCAATCTGATGGTTCTTTCCTTGATGATGACCAGATTGAAGGTGGTTTTGTTCTT 445 Query 138697 ACTTGCGTAGCATACCCCACATCCGATTGTATAATTGAAACTGAAAAAGAGGACGAACT 138755 ||||| || || || || | || ||| | | ||||| ||| | || || || ||||| Sbjct 446 ACTTGTGTTGCTTATCCTAAGTCTGATGTTGTTATTGAGACTCACAAGGAAGAAGAACT 504 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 605655359206240