Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Colletotrichum_20gloeosporioides_20[genbank_20GCA_5F002189585.1_2020
17-06-09] 1,564 sequences; 57,603,470 total letters
Query= NC_026268.1
Length=139132
Score E
Sequences producing significant alignments: (Bits) Value
seq428 82.4 7e-11
>seq428
Length=571
Score = 82.4 bits (90), Expect = 7e-11
Identities = 143/208 (69%), Gaps = 0/208 (0%)
Strand=Plus/Minus
Query 25171 CAACATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGC 25230
||| ||||| | || || ||||| ||||||| ||| | ||||| |||| |||||
Sbjct 569 CAAAATGCAGATTTTCGTGAAAACCCTAACCGGGAAAACCATCACCCTCGAGGTCGAGAG 510
Query 25231 CAACGATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGA 25290
|| ||| || ||||| | || || || ||| || ||||| ||||| || || ||
Sbjct 509 CAGCGACACCATCGACAATGTCAAGACCAAGATTCAAGACAAAGAAGGTATCCCTCCGGA 450
Query 25291 TCAGCAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAATGTCAGCGATTA 25350
|||||| | | |||| || || || || || ||||||| | | | ||||||
Sbjct 449 TCAGCAGCGTTTGATTTTCGCTGGTAAGCAGCTTGAAGATGGACGCACCTTGGCCGATTA 390
Query 25351 CAATATTCAAAAAGAATCCACCATTCAT 25378
|||||| || || ||||| || |||||
Sbjct 389 CAATATCCAGAAGGAATCTACTCTTCAT 362
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 445085698404480
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |