Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Colletotrichum_20gloeosporioides_20[genbank_20GCA_5F002189585.1_2020 17-06-09] 1,564 sequences; 57,603,470 total letters Query= NC_026923.1 Length=179110 Score E Sequences producing significant alignments: (Bits) Value seq456 102 9e-17 >seq456 Length=562 Score = 102 bits (112), Expect = 9e-17 Identities = 134/186 (72%), Gaps = 0/186 (0%) Strand=Plus/Plus Query 158844 TACATTCTAGACGCTGCAGAAGAGGCAGGAGTTGATATTAACTATTCCTGTCGTGCTGGT 158903 |||||||| ||| ||| ||||| | ||| ||||| | || || || | |||||| Sbjct 287 TACATTCTTGACCATGCTGAAGAAGTTGGAATTGATCTCCCTTACTCATGCAGAGCTGGT 346 Query 158904 GCCTGTTCTTCCTGTGCTGGTAAACTTGTCAGCGGAACTGTTGACCAAAGCGATCAGTCA 158963 | |||||||| |||||||||||| |||| | || ||||| ||| ||| || Sbjct 347 TCTTGTTCTTCATGTGCTGGTAAAGTTGTTGGGGGTGAAGTTGATCAATCTGATGGTTCT 406 Query 158964 TTCTTGGATGATGATCAGATTGCAGAAGGATTTATCCTTACGTGTGTATCTTATCCCACT 159023 ||| | |||||||| ||||||| || || ||| | ||||| ||||| ||||||| | Sbjct 407 TTCCTTGATGATGACCAGATTGAAGGTGGTTTTGTTCTTACTTGTGTTGCTTATCCTAAG 466 Query 159024 TCTGAT 159029 |||||| Sbjct 467 TCTGAT 472 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 573012797380800