Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Colletotrichum_20gloeosporioides_20[genbank_20GCA_5F002189585.1_2020
17-06-09] 1,564 sequences; 57,603,470 total letters
Query= NC_026924.1
Length=174885
Score E
Sequences producing significant alignments: (Bits) Value
seq456 91.5 2e-13
>seq456
Length=562
Score = 91.5 bits (100), Expect = 2e-13
Identities = 118/163 (72%), Gaps = 0/163 (0%)
Strand=Plus/Plus
Query 161141 GCAGAAGAGGCAGGAGTTGATATTAACTATTCTTGTCGTGCTGGTGCTTGCTCTTCCTGT 161200
|| ||||| | ||| ||||| | || || || | |||||| |||| ||||| |||
Sbjct 302 GCTGAAGAAGTTGGAATTGATCTCCCTTACTCATGCAGAGCTGGTTCTTGTTCTTCATGT 361
Query 161201 GCAGGTAAAATTATTTCAGGTACAGTAGACCAGTCTGACCAGTCCTTCTTGGATGATGAC 161260
|| |||||| || || ||| ||| || || ||||| || ||| | |||||||||
Sbjct 362 GCTGGTAAAGTTGTTGGGGGTGAAGTTGATCAATCTGATGGTTCTTTCCTTGATGATGAC 421
Query 161261 CAGATTGAATCTGGATTCCTTTTGACATGTGTTGCATATCCTA 161303
||||||||| ||| || || | || |||||||| |||||||
Sbjct 422 CAGATTGAAGGTGGTTTTGTTCTTACTTGTGTTGCTTATCCTA 464
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 559493061696800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |