Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Colletotrichum_20gloeosporioides_20[genbank_20GCA_5F002189585.1_2020 17-06-09] 1,564 sequences; 57,603,470 total letters Query= NC_026924.1 Length=174885 Score E Sequences producing significant alignments: (Bits) Value seq456 91.5 2e-13 >seq456 Length=562 Score = 91.5 bits (100), Expect = 2e-13 Identities = 118/163 (72%), Gaps = 0/163 (0%) Strand=Plus/Plus Query 161141 GCAGAAGAGGCAGGAGTTGATATTAACTATTCTTGTCGTGCTGGTGCTTGCTCTTCCTGT 161200 || ||||| | ||| ||||| | || || || | |||||| |||| ||||| ||| Sbjct 302 GCTGAAGAAGTTGGAATTGATCTCCCTTACTCATGCAGAGCTGGTTCTTGTTCTTCATGT 361 Query 161201 GCAGGTAAAATTATTTCAGGTACAGTAGACCAGTCTGACCAGTCCTTCTTGGATGATGAC 161260 || |||||| || || ||| ||| || || ||||| || ||| | ||||||||| Sbjct 362 GCTGGTAAAGTTGTTGGGGGTGAAGTTGATCAATCTGATGGTTCTTTCCTTGATGATGAC 421 Query 161261 CAGATTGAATCTGGATTCCTTTTGACATGTGTTGCATATCCTA 161303 ||||||||| ||| || || | || |||||||| ||||||| Sbjct 422 CAGATTGAAGGTGGTTTTGTTCTTACTTGTGTTGCTTATCCTA 464 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 559493061696800