Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Colletotrichum_20gloeosporioides_20[genbank_20GCA_5F002189585.1_2020 17-06-09] 1,564 sequences; 57,603,470 total letters Query= NC_026926.1 Length=192108 Score E Sequences producing significant alignments: (Bits) Value seq456 87.8 2e-12 >seq456 Length=562 Score = 87.8 bits (96), Expect = 2e-12 Identities = 153/222 (69%), Gaps = 3/222 (1%) Strand=Plus/Plus Query 179435 CACCTGATGGAACTGAAACGTCCTTCCCATGTGAGGATGATCAGTATATCCTTGACGCTG 179494 |||| ||||||||| || || | |||| |||||| || || |||||| || Sbjct 246 CACCAGATGGAACTCAAGAGT---TTGAATGTCCAGATGATGTTTACATTCTTGACCATG 302 Query 179495 CTGAAGAAGCAGGTGTAGATATCAATTACTCTTGTCGTGCTGGTGCTTGTTCATCTTGTG 179554 ||||||||| || | ||| || |||||| || | |||||| ||||||| || |||| Sbjct 303 CTGAAGAAGTTGGAATTGATCTCCCTTACTCATGCAGAGCTGGTTCTTGTTCTTCATGTG 362 Query 179555 CTGGTAAATTAGAGAGTGGATCTGTTGATCAAAGCGATCAATCGTTTTTGGATGACGATC 179614 |||||||| | | | || ||||||||| ||| || || | ||||| || | Sbjct 363 CTGGTAAAGTTGTTGGGGGTGAAGTTGATCAATCTGATGGTTCTTTCCTTGATGATGACC 422 Query 179615 AAATGGAGTCGGGATTTATTCTGACTTGCGTATCTTATCCTA 179656 | || || || ||| |||| ||||| || ||||||||| Sbjct 423 AGATTGAAGGTGGTTTTGTTCTTACTTGTGTTGCTTATCCTA 464 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 614605584225920