Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Colletotrichum_20gloeosporioides_20[genbank_20GCA_5F002189585.1_2020
17-06-09] 1,564 sequences; 57,603,470 total letters
Query= NC_026928.1
Length=189418
Score E
Sequences producing significant alignments: (Bits) Value
seq456 123 3e-23
>seq456
Length=562
Score = 123 bits (136), Expect = 3e-23
Identities = 161/222 (73%), Gaps = 3/222 (1%)
Strand=Plus/Plus
Query 176302 CACCTGATGGAACTGAAACGTCCTTCCCATGTGAGGATGATCAGTATATCCTTGACGCTG 176361
|||| ||||||||| || || | |||| |||||| || || |||||| ||
Sbjct 246 CACCAGATGGAACTCAAGAGT---TTGAATGTCCAGATGATGTTTACATTCTTGACCATG 302
Query 176362 CTGAAGAAGCAGGTGTAGATATCAATTACTCTTGTCGTGCTGGTGCTTGTTCATCTTGTG 176421
||||||||| || | ||| || |||||| || | |||||| ||||||| || ||||
Sbjct 303 CTGAAGAAGTTGGAATTGATCTCCCTTACTCATGCAGAGCTGGTTCTTGTTCTTCATGTG 362
Query 176422 CTGGCAAACTAGAGAGTGGTTCTGTTGATCAGAGTGATCAGTCTTTCCTGGATGATGATC 176481
|||| ||| | | | ||| |||||||| |||| |||||||| |||||||| |
Sbjct 363 CTGGTAAAGTTGTTGGGGGTGAAGTTGATCAATCTGATGGTTCTTTCCTTGATGATGACC 422
Query 176482 AAATTGAATCTGGTTTTATTCTGACTTGCGTATCTTATCCTA 176523
| |||||| ||||||| |||| ||||| || |||||||||
Sbjct 423 AGATTGAAGGTGGTTTTGTTCTTACTTGTGTTGCTTATCCTA 464
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 605997752512320
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |