Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Colletotrichum_20gloeosporioides_20[genbank_20GCA_5F002189585.1_2020 17-06-09] 1,564 sequences; 57,603,470 total letters Query= NC_027132.1 Length=190768 Score E Sequences producing significant alignments: (Bits) Value seq456 102 1e-16 >seq456 Length=562 Score = 102 bits (112), Expect = 1e-16 Identities = 155/220 (70%), Gaps = 3/220 (1%) Strand=Plus/Plus Query 177346 CACCAGATGGAACTGAAGAGTCCTTCCCTTGTGAAGACGATCAGTACATCCTCGACGCCG 177405 |||||||||||||| |||||| | ||| ||| ||| ||||| || ||| | Sbjct 246 CACCAGATGGAACTCAAGAGT---TTGAATGTCCAGATGATGTTTACATTCTTGACCATG 302 Query 177406 CTGAAGAAGCAGGTGTTGATATTAATTACTCATGCCGCGCTGGTGCTTGTTCATCCTGTG 177465 ||||||||| || ||||| | |||||||||| | |||||| ||||||| || |||| Sbjct 303 CTGAAGAAGTTGGAATTGATCTCCCTTACTCATGCAGAGCTGGTTCTTGTTCTTCATGTG 362 Query 177466 CTGGTAAACTTGAGAGTGGTAGTGTAGATCAAAGCGATCAATCGTTCTTGGATGACGATC 177525 |||||||| ||| | ||| || |||||| ||| || ||| | ||||| || | Sbjct 363 CTGGTAAAGTTGTTGGGGGTGAAGTTGATCAATCTGATGGTTCTTTCCTTGATGATGACC 422 Query 177526 AAATGGAGTCAGGATTTATTCTGACCTGTGTGTCATATCC 177565 | || || || ||| |||| || ||||| | ||||| Sbjct 423 AGATTGAAGGTGGTTTTGTTCTTACTTGTGTTGCTTATCC 462 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 610317668056320