Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Colletotrichum_20gloeosporioides_20[genbank_20GCA_5F002189585.1_2020 17-06-09] 1,564 sequences; 57,603,470 total letters Query= NC_031038.1 Length=222832 Score E Sequences producing significant alignments: (Bits) Value seq211 138 2e-27 >seq211 Length=153984 Score = 138 bits (152), Expect = 2e-27 Identities = 434/672 (65%), Gaps = 8/672 (1%) Strand=Plus/Plus Query 76549 ACCAGGACATTCATTCGGACACATCAATGACCACTCACCATCTTCCTTAACCCGTTTCAT 76608 ||| || || || || |||||||||| || ||| ||||| | | || || || ||||| Sbjct 109197 ACCCGGGCACTCGTTGGGACACATCAGTGTCCAGTCACCGTTCTTCTCCACTCGCTTCAT 109256 Query 76609 AAAGAGATCAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTACGTTCTTCATTTCC 76668 ||||||||||| ||||| || || | || || || |||| | || || || || Sbjct 109257 GAAGAGATCAGGGATCCAAAGGGCGAGGAAAAGGTCACGGGCACGGACCTCCTCCTTGCC 109316 Query 76669 TGTATTCTTTTTAAGATCTAGGAACTCCATAATATCAGAATGCCATGGTTCTAGATATAT 76728 ||||| || || | ||||| | | || | |||||| || || || || || Sbjct 109317 GTGGTTCTTGCGGAGGTCCAAAAACTCGAAGACGTCGGCATGCCAGGGCTCGAGGTAGAT 109376 Query 76729 CGCCATAACACCCGGTCGTTTATTACCTCCCTGATCTATATATCTGGCAGTGTTATTATA 76788 || | |||| || || || || || ||||| || | ||| | ||| ||||| || | Sbjct 109377 GGCAAAGGCACCGGGGCGCTTGTTGCCACCCTGGTCGACATAGCGGGCGGTGTTGTTGAA 109436 Query 76789 AACTCTCAACATTGGAATAATGCCGTTAGATGTACCATTTGTTCCAGAAATATAACTTCC 76848 || | | ||| || ||| ||||| || || ||||| || || | || || || Sbjct 109437 GACGCGGAGCATAGGGGTAACACCGTTGGAGGTGCCATTGGTGCCGGCGATGTAGGAGCC 109496 Query 76849 ACATGCACGAATATTACTAATAGATAGGCCTATTCCTCCTGCCATTTTAGAGATTAGAGC 76908 | ||||| || | | ||| || || || || |||||||| || || | || Sbjct 109497 AGTGGCACGGATGCGGTGGACATTTAGACCAATGCCGCCGGCCATTTTTGATATCATGGC 109556 Query 76909 ACAGCGTTTCAATGTGTCATAGATGCCCTCTATACTATCATCCATCATGTTAAGAAGAAA 76968 ||| |||| ||||| ||||||||||| ||| || ||| |||||| | ||||| Sbjct 109557 GCAGGTCTTCAGAGTGTCGTAGATGCCCTCAATAGAGTCTTCCTTCATGTCGACGAGAAA 109616 Query 76969 ACAGCTAGACATTTGATGATGAACAGTTCCTGCATTAAACAATGTAGGAGATGCATGAGT 77028 ||| |||| || || ||| || || || |||||||| || || || || || Sbjct 109617 GCAGGACGACAGCTGTGCCTGGGGAGTACCGGCGTTGAACAATGTGGGCGAAGCGTGGGT 109676 Query 77029 GAACCATTTTTCAGAAAGTAGATTGTATGTTTCAATAACTGCTTCTATATC----CCATT 77084 ||| || || || | | |||||||| ||||| || || | ||| || Sbjct 109677 GAAGCACTTGCTCGACATCAAGTTGTATGTCTCAATGACGCGCTCAACATCGTCGCCCCA 109736 Query 77085 GATGAATTCCTACAGCGACACGCATCAACATATGCTGAGGTCGTTCTACAGTCTTATTAT 77144 |||| || || || || ||||| | ||| ||||| |||| || || |||| || Sbjct 109737 GATG----CCAACGGCAACGCGCATGATCATGTGCTGTGGTCTCTCGGCAATCTTGCCAT 109792 Query 77145 TTATTTTCAACAAGTATGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGT 77204 | || | | || ||| | ||||| || ||||| || || || | ||| |||| Sbjct 109793 CAAGCTTGAGAAGATAGGATCTCTCCAAGGTCTTAAAGCCGAAGTATTGGTAGTTGAAGT 109852 Query 77205 CTCTTTCGTAAA 77216 | | ||||||| Sbjct 109853 CGCGGTCGTAAA 109864 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 712920462132480