Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Colletotrichum_20gloeosporioides_20[genbank_20GCA_5F002189585.1_2020
17-06-09] 1,564 sequences; 57,603,470 total letters
Query= NC_031038.1
Length=222832
Score E
Sequences producing significant alignments: (Bits) Value
seq211 138 2e-27
>seq211
Length=153984
Score = 138 bits (152), Expect = 2e-27
Identities = 434/672 (65%), Gaps = 8/672 (1%)
Strand=Plus/Plus
Query 76549 ACCAGGACATTCATTCGGACACATCAATGACCACTCACCATCTTCCTTAACCCGTTTCAT 76608
||| || || || || |||||||||| || ||| ||||| | | || || || |||||
Sbjct 109197 ACCCGGGCACTCGTTGGGACACATCAGTGTCCAGTCACCGTTCTTCTCCACTCGCTTCAT 109256
Query 76609 AAAGAGATCAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTACGTTCTTCATTTCC 76668
||||||||||| ||||| || || | || || || |||| | || || || ||
Sbjct 109257 GAAGAGATCAGGGATCCAAAGGGCGAGGAAAAGGTCACGGGCACGGACCTCCTCCTTGCC 109316
Query 76669 TGTATTCTTTTTAAGATCTAGGAACTCCATAATATCAGAATGCCATGGTTCTAGATATAT 76728
||||| || || | ||||| | | || | |||||| || || || || ||
Sbjct 109317 GTGGTTCTTGCGGAGGTCCAAAAACTCGAAGACGTCGGCATGCCAGGGCTCGAGGTAGAT 109376
Query 76729 CGCCATAACACCCGGTCGTTTATTACCTCCCTGATCTATATATCTGGCAGTGTTATTATA 76788
|| | |||| || || || || || ||||| || | ||| | ||| ||||| || |
Sbjct 109377 GGCAAAGGCACCGGGGCGCTTGTTGCCACCCTGGTCGACATAGCGGGCGGTGTTGTTGAA 109436
Query 76789 AACTCTCAACATTGGAATAATGCCGTTAGATGTACCATTTGTTCCAGAAATATAACTTCC 76848
|| | | ||| || ||| ||||| || || ||||| || || | || || ||
Sbjct 109437 GACGCGGAGCATAGGGGTAACACCGTTGGAGGTGCCATTGGTGCCGGCGATGTAGGAGCC 109496
Query 76849 ACATGCACGAATATTACTAATAGATAGGCCTATTCCTCCTGCCATTTTAGAGATTAGAGC 76908
| ||||| || | | ||| || || || || |||||||| || || | ||
Sbjct 109497 AGTGGCACGGATGCGGTGGACATTTAGACCAATGCCGCCGGCCATTTTTGATATCATGGC 109556
Query 76909 ACAGCGTTTCAATGTGTCATAGATGCCCTCTATACTATCATCCATCATGTTAAGAAGAAA 76968
||| |||| ||||| ||||||||||| ||| || ||| |||||| | |||||
Sbjct 109557 GCAGGTCTTCAGAGTGTCGTAGATGCCCTCAATAGAGTCTTCCTTCATGTCGACGAGAAA 109616
Query 76969 ACAGCTAGACATTTGATGATGAACAGTTCCTGCATTAAACAATGTAGGAGATGCATGAGT 77028
||| |||| || || ||| || || || |||||||| || || || || ||
Sbjct 109617 GCAGGACGACAGCTGTGCCTGGGGAGTACCGGCGTTGAACAATGTGGGCGAAGCGTGGGT 109676
Query 77029 GAACCATTTTTCAGAAAGTAGATTGTATGTTTCAATAACTGCTTCTATATC----CCATT 77084
||| || || || | | |||||||| ||||| || || | ||| ||
Sbjct 109677 GAAGCACTTGCTCGACATCAAGTTGTATGTCTCAATGACGCGCTCAACATCGTCGCCCCA 109736
Query 77085 GATGAATTCCTACAGCGACACGCATCAACATATGCTGAGGTCGTTCTACAGTCTTATTAT 77144
|||| || || || || ||||| | ||| ||||| |||| || || |||| ||
Sbjct 109737 GATG----CCAACGGCAACGCGCATGATCATGTGCTGTGGTCTCTCGGCAATCTTGCCAT 109792
Query 77145 TTATTTTCAACAAGTATGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGT 77204
| || | | || ||| | ||||| || ||||| || || || | ||| ||||
Sbjct 109793 CAAGCTTGAGAAGATAGGATCTCTCCAAGGTCTTAAAGCCGAAGTATTGGTAGTTGAAGT 109852
Query 77205 CTCTTTCGTAAA 77216
| | |||||||
Sbjct 109853 CGCGGTCGTAAA 109864
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 712920462132480
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |