Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Colletotrichum_20gloeosporioides_20[genbank_20GCA_5F002189585.1_2020
17-06-09] 1,564 sequences; 57,603,470 total letters
Query= NC_031235.1
Length=194437
Score E
Sequences producing significant alignments: (Bits) Value
seq456 129 7e-25
>seq456
Length=562
Score = 129 bits (142), Expect = 7e-25
Identities = 172/238 (72%), Gaps = 1/238 (0%)
Strand=Plus/Plus
Query 170979 TTTGAATGTGCTGAAGATCAATATATTCTTGATGCTGCTGAAGAAGCAGGATTTGATTTG 171038
||||||||| | || ||| || |||||||| ||||||||||| ||| ||||| |
Sbjct 266 TTTGAATGTCCAGATGATGTTTACATTCTTGACCATGCTGAAGAAGTTGGAATTGATCTC 325
Query 171039 AACTATTCGTGTCGTGCTGGTGCTTGTTCGACCTGTGCTGGGAAAATTGAGAGTGGTTCT 171098
|| || || | |||||| ||||||| | |||||||| ||| ||| | |||
Sbjct 326 CCTTACTCATGCAGAGCTGGTTCTTGTTCTTCATGTGCTGGTAAAGTTGTTGGGGGTGAA 385
Query 171099 GTTGATCAATCCGATCAATCTTTCCTTGATGATGATCAGATTGAATCAGGTTTCATTCTG 171158
||||||||||| ||| ||||||||||||||||| ||||||||| ||||| ||||
Sbjct 386 GTTGATCAATCTGATGGTTCTTTCCTTGATGATGACCAGATTGAAGGTGGTTTTGTTCTT 445
Query 171159 ACCTGCGTCTCATATCCTACAAGTGATTGTGTAATCTTGACTGAACAGGAAG-AGAAC 171215
|| || || | ||||||| |||| ||| || |||| | |||||| |||||
Sbjct 446 ACTTGTGTTGCTTATCCTAAGTCTGATGTTGTTATTGAGACTCACAAGGAAGAAGAAC 503
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 622058238523680
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |