Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Colletotrichum_20godetiae_20[genbank_20GCA_5F001663355.1_202016-06- 15] 1,819 sequences; 35,034,269 total letters Query= NC_001650.2 Length=184439 Score E Sequences producing significant alignments: (Bits) Value seq415 154 2e-32 >seq415 Length=23879 Score = 154 bits (170), Expect = 2e-32 Identities = 214/297 (72%), Gaps = 2/297 (1%) Strand=Plus/Plus Query 145870 ACGTAGAACTG-GCACAGGAGGTGGCAGGGCGGCAGGGCCATGGCGGGCAGGTCCGCCGG 145928 ||||||||||| ||| | | |||||| || || |||||||| |||||||| || Sbjct 2567 ACGTAGAACTGCGCAAAC-ATGTGGCACGGTGGGAGGGCCATCTTCTTGAGGTCCGCTGG 2625 Query 145929 GTTCCAGGCGGTGAGGACGAGCCTCCTGCTCTCGGGGTTCCTCTTGATCTCCCCTATCAG 145988 |||||| ||| |||||| | | | | | ||||||| |||||| || || | Sbjct 2626 GTTCCACGCGCTGAGGAGAATGCGGCGGTCGTAGGGGTTCGTCTTGAGCTTGTGGATGAC 2685 Query 145989 GTCCCTGAGCTGGTCCACGCCCTGCCCCCGGTAATCTGTCTTGGAGTCCACGTACGCGGC 146048 || | ||||| ||||| || ||| |||||| ||||||||||| |||||| | || Sbjct 2686 CTCGGCCAATTGGTCGACGCCTTGGCCCGTGTAATCCGTCTTGGAGTCGACGTACTCAGC 2745 Query 146049 CCCGAAGTGCCTCCACTGGAACCCGTAGACGGGCCCCAGGTCCCCGGGCTCCCTGTGCCC 146108 || ||||| | ||| ||||| ||||||||||| || ||||| ||| || | ||| Sbjct 2746 GCCAAAGTGGCGCCATTGGAAGCCGTAGACGGGGCCGAGGTCGCCGACTTCGCGGTGTGA 2805 Query 146109 CAGCCCGGCCCGGGCGAGGAAGTCCCGGGACCCGTTGGCGTCCCAGATCTTGACGCC 146165 || ||| | | | ||||||| || || || |||||| |||||||||| |||||||| Sbjct 2806 GAGGCCGACGCTGTCGAGGAACTCGCGCGATCCGTTGCCGTCCCAGATTTTGACGCC 2862 Score = 114 bits (126), Expect = 2e-20 Identities = 134/181 (74%), Gaps = 0/181 (0%) Strand=Plus/Plus Query 145671 CAGCTGGAGCTTCAGGGGCTCCACGTGGTTGAGGTAGACGTGCGCGTCCCCCAGGACGTG 145730 |||||| | ||| || | |||||||||| ||| ||||||||||| |||| |||||| Sbjct 2311 CAGCTGCACCTTGAGCGCGTCCACGTGGTCCGCGTATACGTGCGCGTCGCCCATGACGTG 2370 Query 145731 GATGAAGTCCCCGGGCTCGAGGCCCGTGAGGTGGGCGACCATGTAGGTCAGCAGGGAGTA 145790 ||| | || ||| | ||| | | || | ||||| ||||| || | ||| Sbjct 2371 CGTGAGGCTTCCCGGCACCAGGTCGCACGCCCGCGCAATCATGTGCGTCAGGAGCGCGTA 2430 Query 145791 GCTGGCTATGTTGAAGGGCACCCCCAGCCCCATGTCCCCCGAGCGCTGGTACAGCTGGCA 145850 |||||| |||||||||||||| || || |||||||| | || ||||||||||||||||| Sbjct 2431 GCTGGCAATGTTGAAGGGCACGCCGAGTCCCATGTCGCAGGACCGCTGGTACAGCTGGCA 2490 Query 145851 G 145851 | Sbjct 2491 G 2491 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 590063383128760