Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Colletotrichum_20godetiae_20[genbank_20GCA_5F001663355.1_202016-06-
15] 1,819 sequences; 35,034,269 total letters
Query= NC_001650.2
Length=184439
Score E
Sequences producing significant alignments: (Bits) Value
seq415 154 2e-32
>seq415
Length=23879
Score = 154 bits (170), Expect = 2e-32
Identities = 214/297 (72%), Gaps = 2/297 (1%)
Strand=Plus/Plus
Query 145870 ACGTAGAACTG-GCACAGGAGGTGGCAGGGCGGCAGGGCCATGGCGGGCAGGTCCGCCGG 145928
||||||||||| ||| | | |||||| || || |||||||| |||||||| ||
Sbjct 2567 ACGTAGAACTGCGCAAAC-ATGTGGCACGGTGGGAGGGCCATCTTCTTGAGGTCCGCTGG 2625
Query 145929 GTTCCAGGCGGTGAGGACGAGCCTCCTGCTCTCGGGGTTCCTCTTGATCTCCCCTATCAG 145988
|||||| ||| |||||| | | | | | ||||||| |||||| || || |
Sbjct 2626 GTTCCACGCGCTGAGGAGAATGCGGCGGTCGTAGGGGTTCGTCTTGAGCTTGTGGATGAC 2685
Query 145989 GTCCCTGAGCTGGTCCACGCCCTGCCCCCGGTAATCTGTCTTGGAGTCCACGTACGCGGC 146048
|| | ||||| ||||| || ||| |||||| ||||||||||| |||||| | ||
Sbjct 2686 CTCGGCCAATTGGTCGACGCCTTGGCCCGTGTAATCCGTCTTGGAGTCGACGTACTCAGC 2745
Query 146049 CCCGAAGTGCCTCCACTGGAACCCGTAGACGGGCCCCAGGTCCCCGGGCTCCCTGTGCCC 146108
|| ||||| | ||| ||||| ||||||||||| || ||||| ||| || | |||
Sbjct 2746 GCCAAAGTGGCGCCATTGGAAGCCGTAGACGGGGCCGAGGTCGCCGACTTCGCGGTGTGA 2805
Query 146109 CAGCCCGGCCCGGGCGAGGAAGTCCCGGGACCCGTTGGCGTCCCAGATCTTGACGCC 146165
|| ||| | | | ||||||| || || || |||||| |||||||||| ||||||||
Sbjct 2806 GAGGCCGACGCTGTCGAGGAACTCGCGCGATCCGTTGCCGTCCCAGATTTTGACGCC 2862
Score = 114 bits (126), Expect = 2e-20
Identities = 134/181 (74%), Gaps = 0/181 (0%)
Strand=Plus/Plus
Query 145671 CAGCTGGAGCTTCAGGGGCTCCACGTGGTTGAGGTAGACGTGCGCGTCCCCCAGGACGTG 145730
|||||| | ||| || | |||||||||| ||| ||||||||||| |||| ||||||
Sbjct 2311 CAGCTGCACCTTGAGCGCGTCCACGTGGTCCGCGTATACGTGCGCGTCGCCCATGACGTG 2370
Query 145731 GATGAAGTCCCCGGGCTCGAGGCCCGTGAGGTGGGCGACCATGTAGGTCAGCAGGGAGTA 145790
||| | || ||| | ||| | | || | ||||| ||||| || | |||
Sbjct 2371 CGTGAGGCTTCCCGGCACCAGGTCGCACGCCCGCGCAATCATGTGCGTCAGGAGCGCGTA 2430
Query 145791 GCTGGCTATGTTGAAGGGCACCCCCAGCCCCATGTCCCCCGAGCGCTGGTACAGCTGGCA 145850
|||||| |||||||||||||| || || |||||||| | || |||||||||||||||||
Sbjct 2431 GCTGGCAATGTTGAAGGGCACGCCGAGTCCCATGTCGCAGGACCGCTGGTACAGCTGGCA 2490
Query 145851 G 145851
|
Sbjct 2491 G 2491
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 590063383128760
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |