Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Colletotrichum_20godetiae_20[genbank_20GCA_5F001663355.1_202016-06-
15] 1,819 sequences; 35,034,269 total letters
Query= NC_008035.3
Length=126629
Score E
Sequences producing significant alignments: (Bits) Value
seq866 82.4 6e-11
>seq866
Length=7889
Score = 82.4 bits (90), Expect = 6e-11
Identities = 138/200 (69%), Gaps = 0/200 (0%)
Strand=Plus/Minus
Query 16724 AGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCC 16783
|| |||| || |||||||||||||| || ||||||||||||| | ||| | | |||
Sbjct 2628 AGAACCAAGTGGAGCGTGGACTCCTTCTGAATGTTGTAGTCGGAGAGGGTGCGGCCATCC 2569
Query 16784 TCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTCG 16843
|| | ||| ||||| ||| | || | ||||| ||||| ||| | |||||| |||||
Sbjct 2568 TCAAGTTGCTTGCCAGCAAAGATCAAACGCTGCTGGTCAGGAGGAATGCCCTCCTTGTCC 2509
Query 16844 GCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGTT 16903
||| | ||| || | | | | || || | ||| || | |||||||||
Sbjct 2508 TGAATCTTGGACTTGACGTTGTCGATGGTATCAGAAGACTCGACCTCAAGGGTGATGGTC 2449
Query 16904 TTTCCGGTCAGCGTTTTGAC 16923
|| ||||| || || |||||
Sbjct 2448 TTGCCGGTGAGGGTCTTGAC 2429
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 405079019578810
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |