Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Colletotrichum_20godetiae_20[genbank_20GCA_5F001663355.1_202016-06-
15] 1,819 sequences; 35,034,269 total letters
Query= NC_008603.1
Length=321240
Score E
Sequences producing significant alignments: (Bits) Value
seq525 109 1e-18
seq720 89.7 1e-12
>seq525
Length=146887
Score = 109 bits (120), Expect = 1e-18
Identities = 246/362 (68%), Gaps = 12/362 (3%)
Strand=Plus/Plus
Query 87559 AAGGCCGGCAATCTTCGCGATG--CTTTTGCCAAGACGAGCGCACCATTCTTTGTCATCT 87616
||||| ||||| ||| | |||| ||||||| |||| |||| | ||||| | ||||
Sbjct 6392 AAGGCTGGCAA-CTT-GAGATGGACTTTTGCTCAGACTAGCGGAGACTTCTTCGCAATCT 6449
Query 87617 TCGATGCTGACTTCTGCCCGCGCAAGGACTTCATCACGGAAATTATGCCATA---CTTCA 87673
||||||| ||||||||||||||| ||||| | | |||| | ||| | |||
Sbjct 6450 TCGATGCCGACTTCTGCCCGCGCCCTGACTTTGTTAAGGAATTGATGGTTGAGCACTTGG 6509
Query 87674 ACTATGACAAATCCATCGCCATCGTCCAGACCCCCCAGTTCTTTGAGGTGCGTCCA-GAC 87732
| | || || | ||| | || || | ||| |||| ||| || | | | |||
Sbjct 6510 GCGACGATAAGACG---GCCCTTGTTCAAAGCCCACAGTACTTCCGTGT-CACCGACGAC 6565
Query 87733 CAGACTTGGGTAGAGCGTGCTGCAGGTTCTGTCCAGGAACTGTTCTACCGCTTCATCCAG 87792
||||||||||| |||| | |||||| || ||||| || |||||||| | | |||
Sbjct 6566 CAGACTTGGGTTGAGCAGGGAGCAGGTGCTACACAGGAGCTTTTCTACCGTGTTGTACAG 6625
Query 87793 GTGTCTCGCGAATCATTTGGCGCTGCAGTGTGCGTGGGTACTTGTGCTATGTATCGTCGC 87852
|| || | || || || || | ||||| |||| ||| | || |||||
Sbjct 6626 GTCAACCGTAATAGATGGGGAGCCTCAATCTGCGTCGGTAGCAATGCCCTCTACCGTCGT 6685
Query 87853 GAGGCCCTGGTGCCATTTGGCGGCACTGCTGAAATCGGTTTCAGCGAGGATGTCCACACC 87912
||| |||| || ||||||| ||||| ||||| |||||| |||||||||||||||
Sbjct 6686 GAGTCCCTTGTCGAGGTTGGCGGAACTGCCGAAATTGGTTTCTCTGAGGATGTCCACACC 6745
Query 87913 GG 87914
||
Sbjct 6746 GG 6747
>seq720
Length=51142
Score = 89.7 bits (98), Expect = 1e-12
Identities = 102/137 (74%), Gaps = 0/137 (0%)
Strand=Plus/Minus
Query 279696 GTAGGTTCTCTGTCGGGTGGTTGGAAGATGAAGCTGGCCCTCACTCGCGCCATTCTACTG 279755
|| || || ||||| ||||| |||||||||||| ||||| | |||| ||||| || |
Sbjct 7820 GTCGGCTCCCTGTCCGGTGGATGGAAGATGAAGTTGGCCTTGGCTCGTGCCATGCTGAAG 7761
Query 279756 CGTGCCGATGTCCTACTGCTTGATGAGCCAACCAACCACATGGACACCACCAACGTAGCC 279815
| || |||||||| |||| || || || || |||||| ||||| ||||| | |||
Sbjct 7760 GGCGCTGATGTCCTGTTGCTGGACGAACCTACTAACCACTTGGACGTTGCCAACATTGCC 7701
Query 279816 TGGCTAGTGTCCTACCT 279832
||||| | | ||||||
Sbjct 7700 TGGCTCGAGAACTACCT 7684
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1027812845299779
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |