Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Colletotrichum_20godetiae_20[genbank_20GCA_5F001663355.1_202016-06-
15] 1,819 sequences; 35,034,269 total letters
Query= NC_009127.1
Length=295146
Score E
Sequences producing significant alignments: (Bits) Value
seq1170 462 4e-125
>seq1170
Length=97779
Score = 462 bits (512), Expect = 4e-125
Identities = 1253/1896 (66%), Gaps = 75/1896 (4%)
Strand=Plus/Minus
Query 243737 ACGCTGAACTGGACGGGTGCGACGGCGGCCTTGGTCCTCAGGTAGTACATGCCGGTCTTG 243796
||| ||||||| | ||| || || |||| || | ||||||||||||||| ||||||
Sbjct 61068 ACGGTGAACTGAATGGGAGCAGAAGCTGCCTGAGTACGCAGGTAGTACATGCCCGTCTTG 61009
Query 243797 AGTCCACTGGACCAGGCGTGGAGGTGCATGGCCGTCAGCTTCTTCATCTTGAGCTTTGGG 243856
|| ||| |||| | || ||||||| || | ||| ||| | | ||
Sbjct 61008 AGACCAAGCTTCCAGCCAGCGAAGTGCATGCTGGTGATCTTGCCCAT-------TGTCGG 60956
Query 243857 TCGTCCTCGCACAGAAAGAGGTTGAGGGACTGGCTCTGGTCGACGAAGGGCGCCCGCTCT 243916
||||| || || ||||||||||||| |||||| | ||||| | || ||
Sbjct 60955 --GTCCTT---CATGTGGATGTTGAGGGACTGGGACTGGTCAATGAAGGCACCACGATCG 60901
Query 243917 GCGGCCATGGTGATGA--GGTCCT-TCTGAGATATCTCATACGCCGTCTTGTAGATGGGC 243973
|| ||||| ||| | ||| | | ||||| || || ||| |||||||| | | |
Sbjct 60900 GCAGCCATC-TGAACAACGGTGCGCTGGGAGATTTCCCAGACG--GTCTTGTACAGAGCC 60844
Query 243974 TTGAGGTGCTCGGGGAACCCTTCGATGTTCTGCACCGAGCCCTTGTGGACGATGAGCTGG 244033
|||| | |||||| ||||||||| || || || || | | |||||| ||
Sbjct 60843 TTGACCTCGGCGGGGATGTTAGGGATGTTCTGAACGGAACCGTTCTCGGCGATGATACGG 60784
Query 244034 GTGCGCATGTTATCGTTCCACAGGCCCAAGCGCTCCAGCGCCTCGACCAGGTGCCTGTTC 244093
| |||| |||| ||||| ||||| | | || ||| | ||| |||
Sbjct 60783 TTCTTCATGGCATCGGACCACAAGCCCATGTCGACAAGATCCTTCAGCAGCCAGGGGTTG 60724
Query 244094 ACCACCTGAAACTCTCCCGACAGCACGCGGCGCTGGTAGAGGTTGCTGCTGAGCGGCTCG 244153
|| ||||| ||||| || | || || ||||||||||||| |||| | || ||||||
Sbjct 60723 ACAACCTGGAACTCGCCGGCGAGAACACGGCGCTGGTAGATGTTGGAGGTGTAGGGCTCG 60664
Query 244154 ATGCTCTCCGTGTTGCCCAGTATCTGCGCCGTGCTCGCAGTCGGCATGGGCGACACCAGC 244213
| || ||| ||||||||| ||||| | ||| ||||| |||||||| | || |||
Sbjct 60663 AAGCACTCGTTGTTGCCCAAGATCTGGGAAGTGGAGGCAGTAGGCATGGGAGCAACAAGC 60604
Query 244214 AGACTGTTCCTCACGCCGTGCCTCTGGAT--GCGGAGTCTGAGCTCGTTCCAGTCCCACA 244271
| |||||| | || |||||| || ||| || || ||| || ||||||||| |
Sbjct 60603 AAACTGTTGCGAACACCGTGCTCCTTGATTTGCTCCTTCAGAGA--GTCCCAGTCCCAGA 60546
Query 244272 TGCCCGAGAGGTCCTCGCGTTTGAGGCCCCACATGTCAAACTGCAGCAGCCCCTTGCTGA 244331
| | ||||| | | | || ||||||||| |||| || | |||| | ||
Sbjct 60545 GGTC--AGAGGGCTTGACATT-------CCACATGTCGTACTGAAGGATACCCTGGGAGA 60495
Query 244332 CGGGGCTGCCCTCGTAGGTCGGGTAGGGACCGTCGCGCTGGGCCAGCTTACAGCTC-TCG 244390
||| ||||||||| || | ||||| ||| || | |||||| | | | | | |
Sbjct 60494 TAGGGGAGCCCTCGTACGTGGAGTAGGTACCCTCCTCCCTGGCCAGTTGAACGGACATGG 60435
Query 244391 TCGAGGGCGGCGTAGTAGATGGTCTCGAAGATCATCTTGTTCATGTCGCGGGCCTTGCCG 244450
|| || ||||||| |||||||||||| || ||| |||| || | ||||| |||| | |
Sbjct 60434 TC-AGAGCGGCGTGGTAGATGGTCTCAAAAATCTTCTTATTGAGATCGCGAGCCT--CAG 60378
Query 244451 CAGGT--GAAGGGGATGCCCATCATCATGAAGACGTCGGCCAGTCCCTGCACGCCGATGC 244508
|| ||| || |||| | | |||| | || || || ||||| || || | |
Sbjct 60377 GAGACTCGAAAGGCATGCGGAGGGCGAGGAAGGCATCAGCAAGACCCTGGACACCAAGAC 60318
Query 244509 CGATGGGTCTGTGTCGCTTGTTGGAGCGCATGGCTTCGGGCACGGGGTAAAAGTTGCCGT 244568
||||||| | ||| ||| ||||| | || || || |||||||| |||| | |
Sbjct 60317 CGATGGGGCGGTGACGCATGTTGCTGTTGCGAGCCTCAGGAACGGGGTAGTGGTTGACAT 60258
Query 244569 CGATCACCTTGTTGAGGTTGCGGGTGATCATGCGGACGACGTCGGCCAGCAGCTGAAAGT 244628
| || | |||||| |||||||| | | | ||| ||| ||| ||| || |
Sbjct 60257 CAATGATCTTGTTCAGGTTGCGAACAACGACCTGAGTGACCTCGTGAAGCTTCTGGAAAT 60198
Query 244629 CGTACTCGTAGGGATCCTCGGCGATGGTGATCCTCACAAACTCGTTG--AGGGCGACGCT 244686
|||| | | |||| || || || || || || | ||||| |
Sbjct 60197 CGTAAAC------ACCCTC----ATTGTAGTCA--ACGAAG--GTAGGCAGGGCAAGAGA 60152
Query 244687 GGCCAGGTTGCAGACGGCCACCTCCTCCGAGTTGGTGTACTGGACAATCTCGGTGCAGAG 244746
||||| ||||||||| || ||||| || | | | ||||| | |||||| ||||||||
Sbjct 60151 GGCCAAGTTGCAGACAGCGACCTCATCGGGGGCGCAGTACTCAATAATCTCAGTGCAGAG 60092
Query 244747 GTTACTGCACTTGATGGTGCCCAGGTGCTGGTGATTGGACTTGGCGTTGCAGGCGTCCTT 244806
||| || |||||| || |||| || || ||| |||| ||| ||| |||||
Sbjct 60091 GTTGGAGCTGCGGATGGTTCCGAGGTTCTTTTGGTTGCTCTTGCGGTTCGCGGCATCCTT 60032
Query 244807 GTAGAGCATGAAGGGCCCCCCGGTCTCGAGCTGGGCGACGAGGACGCTGTTCCAGAGGTC 244866
||| ||||||||||| |||||||| ||| || |||||| | || ||| || |
Sbjct 60031 GTAAAGCATGAAGGGGTTGCCGGTCTCAGTCTGAGCCTCGAGGATGGCGTACCAAAGCTT 59972
Query 244867 CCTAGCCTTGACCGTCCTGCGAGCCTTGCCCTCTGCCTCGTAGCGGGTGTACAGGGCCTC 244926
| ||||||| ||| ||||| |||||||||| |||||| ||||| ||||||
Sbjct 59971 CTGGGCCTTGATGGTCTTGCGACCCTTGCCCTCGCGCTCGTACTTTTCGTACAAGGCCTC 59912
Query 244927 GAACTCGGGGCCCCAGACCTCGTCTAGGCCGGGGCACGACGCCGGGCACATGAGACTCCA 244986
||||| ||| || || | |||||||||||| ||||||||||| ||||
Sbjct 59911 AAACTCCTCGCCGTAGCAGTCAGCCAGGCCGGGGCACTCGTTGGGGCACATGAGGGTCCA 59852
Query 244987 CTCGCCGCCGTCCTTGACCCTCTGCATGAAGAGGTCGGGGATCCAGAGGGCCTGGAAGAG 245046
||| || | || ||| |||| |||||| || ||||||||||||||||| |||| ||
Sbjct 59851 TTCGGCGTTCTTCTCGACTCTCTTCATGAACAGATCGGGGATCCAGAGGGCGAGGAAAAG 59792
Query 245047 GTCCCTGGTCCTCTGCTCGTCCGAGCCAGTGTTCTTCCTCAGCTCCAAAAAGTCAAAGAC 245106
||| | || | ||| ||| ||| |||||| | || |||| || || |||||
Sbjct 59791 GTCACGGGCACGGACCTCCTCCTTGCCGTGGTTCTTGCGCAAGTCCATGAACTCGAAGAC 59732
Query 245107 GTCGACGTGCCAGGGCTCCATGTAGACAGCGAGGGCGCCGGGCCGCTTGTTGCCTCCCTG 245166
||| ||||||||||||| | ||||| |||| ||| || || ||||||||||| |||||
Sbjct 59731 ATCGGCGTGCCAGGGCTCAAGGTAGATGGCGAAGGCACCAGGACGCTTGTTGCCACCCTG 59672
Query 245167 GTCCACCATCCTCTCGAGC----GCGTTGAAGATGCGCAGGGTAGGCACTATGCCGTTAG 245222
||| | | | ||||| |||||||| || || | || | | ||||||||
Sbjct 59671 GTCGA----CGTAGCGAGCAGTGTTGTTGAAGACACGAAGCATGGGAATGACGCCGTTAG 59616
Query 245223 AGTGGCCGTTGGTGCCCTTGATGTAGGCGCCCTTGCCCCTGA---GGTTGCTGATGGACA 245279
|| |||||||||||| ||||||| ||| || | | || ||| | || |
Sbjct 59615 AGGTGCCGTTGGTGCCGGCAATGTAGGAGCCAGTGGCACGGATACGGTGAGCGTTG---A 59559
Query 245280 TGCCTAGTCCGCCGGCGTGCTTGGAGATGAGGGCGCAGCTCTTGATGGTGTCTGCTATGC 245339
||| | || || || ||||||||| | ||||||| |||||| |||||| || |
Sbjct 59558 GGCCAATGCCACCAGCCATCTTGGAGATCATGGCGCAGGTCTTGAGGGTGTCGTAGATAC 59499
Query 245340 CCTCCATGCTGTCCGACTTCATGTTGAGCAGAAAGCAGGAGGACAGCTGGGGCTTGGGGC 245399
|||| ||| ||| |||||||| || || ||||| || ||||||||| || |||
Sbjct 59498 CCTCAATGGAGTCTTCCTTCATGTCGACGAGGAAGCATGAAGACAGCTGGCACTGAGGGG 59439
Query 245400 TGCACGAGTTGAACAGAGTGGGGCTGGCGTGGGTAAAGTAGCGGCTCGAGAGGAACCCGT 245459
| | | ||||| || |||||| |||||| || ||| | ||| || | || ||
Sbjct 59438 TACCGGCATTGAAAAGTGTGGGGGAGGCGTGTGTGAAGAACTTGCTGGACATGAGGTTGT 59379
Query 245460 ACGTCTGGA-GCAGAGCGTCGATGTTGTCGCCGTGGATCTGCAGGGCGCACCTCATGAGG 245518
| |||| || | | || || | | |||||| ||| | ||| | |||||
Sbjct 59378 AGGTCTCGATGACGCGC-TCAACATCGTCGCCCCAGATACCGACTGCGACACGCATGATC 59320
Query 245519 GTGTGCTGGGGCGTCTCG---ATGGGTCCCTCGGGTCCCTTGAGCATGTAGGAGCGCTCG 245575
||||||| || ||||| || || ||| | |||||||| ||| || | |||
Sbjct 59319 ATGTGCTGCGGTCTCTCGGCAATCTTGCCGTCGAG---CTTGAGCAGGTATGATCTCTCC 59263
Query 245576 AGCGTCTTGAACCCAAAGTACGAGTAGCCAAAGTCG 245611
|| |||||||| || ||||| |||| ||||||
Sbjct 59262 AGAGTCTTGAAGCCGAAGTATTGGTAGTTGAAGTCG 59227
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 944317728087440
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |