Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Colletotrichum_20godetiae_20[genbank_20GCA_5F001663355.1_202016-06-
15] 1,819 sequences; 35,034,269 total letters
Query= NC_009898.1
Length=368683
Score E
Sequences producing significant alignments: (Bits) Value
seq866 122 2e-22
>seq866
Length=7889
Score = 122 bits (134), Expect = 2e-22
Identities = 163/227 (72%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306
||||| || || | || || ||||| | || || || ||||| || ||||| |
Sbjct 2871 CCACCACGCAGACGGAGGACAAGATGCAGGGTAGACTCCTTCTGGATGTTGTAGTCCGAC 2812
Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366
| |||||| ||||| || | || ||||| |||||||||| ||||| || |||
Sbjct 2811 AACGTGCGACCGTCCTCAAGCTGCTTTCCGGCGAAGATCAAGCGCTGCTGGTCGGGGGGG 2752
Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426
|| || || ||||| ||||| |||| || ||||| || || | || ||||| ||
Sbjct 2751 ATACCCTCCTTATCTTGGATCTTCGACTTAACGTTGTCAATGGTGTCTGAAGATTCAACC 2692
Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473
||||||||||| ||||| || || |||||||| ||||| ||||||||
Sbjct 2691 TCGAGCGTGATTGTCTTGCCAGTAAGAGTCTTCACGAAGATCTGCAT 2645
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1179626907048282
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |