Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Colletotrichum_20godetiae_20[genbank_20GCA_5F001663355.1_202016-06- 15] 1,819 sequences; 35,034,269 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq1170 203 4e-47 >seq1170 Length=97779 Score = 203 bits (224), Expect = 4e-47 Identities = 1107/1754 (63%), Gaps = 61/1754 (3%) Strand=Plus/Minus Query 113597 CGGAGGTAGTACATCCCCGTCTTGAGCCCCTGCTTCCAGGCATACATATGCATCGAGGAC 113656 || ||||||||||| ||||||||||| || |||||||| || | ||||| || Sbjct 61032 CGCAGGTAGTACATGCCCGTCTTGAGACCAAGCTTCCAGCCAGCGAAGTGCATGCTGGTG 60973 Query 113657 AACTTGGAGAGTGTTGGACTTTCCATGAAGAGGTTCATACTTTGGGATTGATCGATGAAG 113716 | |||| | ||| || | |||| || ||| | ||||| || || |||||| Sbjct 60972 ATCTTGCCCATTGTCGGGTCCTTCATGTGGATGTTGAGGGACTGGGACTGGTCAATGAAG 60913 Query 113717 CGTCCACGATCCGCCGCCATATCAATCACATCCTTCATCTTG---ATTTCCCACACAGTT 113773 |||||||| || ||||| | || || | | || | |||||||| || || Sbjct 60912 GCACCACGATCGGCAGCCATCTGAA---CAACGGTGCGCTGGGAGATTTCCCAGACGGTC 60856 Query 113774 CTGTAGAGGTTCTTAATATCATCTGGGATATCCACGATATTTTGGATGGAGCCACCCGCC 113833 |||| || ||| | || | ||||| | ||| || || | ||| ||| | Sbjct 60855 TTGTACAGAGCCTTGACCTCGGCGGGGATGTTAGGGATGTTCTGAACGGA---ACCGTTC 60799 Query 113834 TTGACCATGAGA---TCCTTCATATCCTTTGACCAGAGACCAATCTTTTTGAGATCCTCC 113890 | | | |||| | | |||||| | | ||||| | || || | ||||||| | Sbjct 60798 TCGGCGATGATACGGTTCTTCATGGCATCGGACCACAAGCCCATGTCGACAAGATCCTTC 60739 Query 113891 ACGAGATGCTTATTGACAACAACAAACTCACCCGCGAGGGTGCGTCTCAGATAGATATTG 113950 | || |||||||| ||||| || ||||| || | | | ||||| ||| Sbjct 60738 AGCAGCCAGGGGTTGACAACCTGGAACTCGCCGGCGAGAACACGGCGCTGGTAGATGTTG 60679 Query 113951 GTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCGGTGGAGGCTGTGGGC 114010 | ||||| ||||| |||||||| ||||| |||||||| |||| |||||||| || ||| Sbjct 60678 GAGGTGTAGGGCTCGAAGCACTCGTTGTTGCCCAAGATCTGGGAAGTGGAGGCAGTAGGC 60619 Query 114011 ATGGGTGCCATGAGAAGGCTGTTACGGAGACCCTTTTCCCTAATGCGTTCCTTGAGGGCG 114070 ||||| || | || | ||||| || | ||| | ||| | || | ||||| || | | Sbjct 60618 ATGGGAGCAACAAGCAAACTGTTGCGAACACCGTGCTCCTTGATTTGCTCCTTCAGAGAG 60559 Query 114071 TCCCAGTCGTAGTTGAGCTTTGTCTCCCCCTGCCACATATCAAACTGGAGGATACCTTGG 114130 |||||||| || | | || | | |||||| || |||| |||||||| ||| Sbjct 60558 TCCCAGTCCCAGAGGTCAGAGGGCTTGACATTCCACATGTCGTACTGAAGGATACCCTGG 60499 Query 114131 GAGGCTGGCGATCCCTCAAATGTCTCGTATGGGCCCTCAACCTCCGCCAATT---CGGAG 114187 ||| || || ||||| | || ||| | ||||| || |||| || |||| Sbjct 60498 GAGATAGGGGAGCCCTCGTACGTGGAGTAGGTACCCTCCTCCCTGGCCAGTTGAACGGAC 60439 Query 114188 CTCGCCTCGAGGGCTGCGTGATACATTGTCTCAAAAATGCGAGCATTCATTGCCTTGGCC 114247 | | | || || ||||| || || ||||||||||| ||| | | ||| Sbjct 60438 ATGGTC---AGAGCGGCGTGGTAGATGGTCTCAAAAATCTTCTTATTGAGATCGCGAGCC 60382 Query 114248 TCGTCGGAATCAAACGCGAGTCGGCACAAAATAAATACATCCGCGAGACCTTGGACACCG 114307 || || || || | | ||| | || |||| || ||||| |||||||| Sbjct 60381 TCAGGAGACTCGAAAGGCATGCGGAGGGCGAGGAAGGCATCAGCAAGACCCTGGACACCA 60322 Query 114308 AGGCCAATTGGGCGATGTCTCATATTAGACTTTCGAGCGGTCTCC---ACGGGATAAAAA 114364 || || || ||||| || | ||| || || ||||| ||| ||||| || Sbjct 60321 AGACCGATGGGGCGGTGACGCATGTTGCTGTTGCGAGC---CTCAGGAACGGGGTAGTGG 60265 Query 114365 TTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATGAAGCTTT 114424 || ||| || | | | || || || || |||| |||| || |||||||| Sbjct 60264 TTGACATCAATGATCTTGTTCAGGTTGCGAACAACGACCTGAGTGACCTCGTGAAGCTTC 60205 Query 114425 TCGTAATCA-AAACTGCG--AGTCTCTTCATTGACATACTTAGGAAGGGCGATTGACGCC 114481 | | |||| |||| | | | | ||| || | |||| ||||| | || ||| Sbjct 60204 TGGAAATCGTAAACACCCTCATTGTAGTCAACGA---AGGTAGGCAGGGCAAGAGAGGCC 60148 Query 114482 AGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTACACAAATTT 114541 | || || |||| | |||||| | |||||| ||||| || || || | || Sbjct 60147 AAGTTGCAGACAGCGACCTCATCGGGGGCGCAGTACTCAATAATCTCAGTGCAGAGGTTG 60088 Query 114542 GAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCATCCTTGTAA 114601 || || ||||| || | ||||||||| || ||| ||| |||||||||||| Sbjct 60087 GAGCTGCGGATGGTTCCGAGGTTCTTTTGGTTGCTCTTGCGGTTCGCGGCATCCTTGTAA 60028 Query 114602 AGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCAGA-CATCGGC 114660 |||||| | || | || ||||| || || | || ||| || || | ||| | | || | Sbjct 60027 AGCATGAAGGGGTTGCCGGTCTCAGTCTGAGCCTCGAGGATGGCGTACCAAAGCTTCTGG 59968 Query 114661 GGCTGGCACAGTGGCGTTGGCTCGCCCCT---CCTC---CTCGTACTTTGTGTAGAGGGC 114714 | || | ||| ||| || |||| |||| |||||||||| ||| | ||| Sbjct 59967 GCCTTG----ATGGTCTTG---CGACCCTTGCCCTCGCGCTCGTACTTTTCGTACAAGGC 59915 Query 114715 TTCAAACTCTTCACCCACGGCCTCTGAGAGCCCTGGTGCCTTATCTGGGCAGAAGAGAGA 114774 |||||||| || || | || | || || || || | ||||| | ||| | Sbjct 59914 CTCAAACTCCTCGCCGTAGCAGTCAGCCAGGCCGGGGCACTCGTTGGGGCACATGAGGGT 59855 Query 114775 CCATTGACCACCCTCCTCAACACGCTTCATGAAGAGGTCTGGGATCCAGAGAGCTGAGAA 114834 ||||| | || ||| || | ||||||||| || || ||||||||||| || ||| Sbjct 59854 CCATTCGGCGTTCTTCTCGACTCTCTTCATGAACAGATCGGGGATCCAGAGGGCGAGGAA 59795 Query 114835 GAGATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAAAGTCCAT 114894 || || || || | || || | || || || ||||| |||| || || | Sbjct 59794 AAGGTCACGGGCACGGACCTCCTCCTTGCCGTGGTTCTTGCGCAAGTCCATGAACTCGAA 59735 Query 114895 GATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTGACCCCTTACGACG------ACC 114948 || ||| |||||||| || || ||||| | |||| | || | |||| || Sbjct 59734 GACATCGGCGTGCCAGGGCTCAAGGTAGATGGCGAAGGCACC---AGGACGCTTGTTGCC 59678 Query 114949 AGCCTGGTTTACATACCTCGCTGTGGCATTAAATACGCGAAGCATTGGAATGATACCATC 115008 | |||||| || || | || ||| || || || |||||||| ||||||| || | Sbjct 59677 ACCCTGGTCGACGTAGCGAGCAGTGTTGTTGAAGACACGAAGCATGGGAATGACGCCGTT 59618 Query 115009 AGATTGGCCATTTGTCCCCCGAA--TACGAGACTTATTGGCTCTGACATCATGGATGTGC 115066 ||| ||| || || || || || ||| | | |||| | || | || || Sbjct 59617 AGAGGTGCCGTTGGTGCCGGCAATGTAGGAGCC--AGTGGCACGGATACGGTGAGCGTTG 59560 Query 115067 ATACCAATACCCCCTGCCCACTTTGAGATTTGCGCGCACTCCGTGAGACTGCCGTAGATC 115126 | ||||| || || ||| ||| ||||| ||||| | |||| || ||||||| Sbjct 59559 AGGCCAATGCCACCAGCCATCTTGGAGATCATGGCGCAGGTCTTGAGGGTGTCGTAGATA 59500 Query 115127 CCGTCGATCGAGTCACCCTTATTTGCGATAAGGAAGCAGCTCGACATTTGTGGCCTTGGT 115186 || || || ||||| |||| | ||| |||||||| |||| || | || Sbjct 59499 CCCTCAATGGAGTCTTCCTTCATGTCGACGAGGAAGCATGAAGACAGCTGGCACTGAGGG 59440 Query 115187 GTACCAGCGTTGAAGAGGGTTGGTGTCGCGTGGATGAACATACCTTG--GGACATCTTAT 115244 ||||| || ||||| || || || | ||||| ||| | | |||| |||||| | Sbjct 59439 GTACCGGCATTGAAAAGTGTGGGGGAGGCGTGTGTGA--AGAACTTGCTGGACATGAGGT 59382 Query 115245 CGTAGGTCTCCAAGACGGCGGGAATGTCTTCCCCGTGAATACCGATCGAGACCCGCATAA 115304 ||||||||| | |||| || || || || ||||||| | ||| ||||| | Sbjct 59381 TGTAGGTCTCGATGACGCGCTCAACATCGTCGCCCCAGATACCGACTGCGACACGCATGA 59322 Query 115305 ACATGTATTGGGGT 115318 ||||| || ||| Sbjct 59321 TCATGTGCTGCGGT 59308 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 597340017672520