Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Colletotrichum_20godetiae_20[genbank_20GCA_5F001663355.1_202016-06-
15] 1,819 sequences; 35,034,269 total letters
Query= NC_010191.2
Length=186713
Score E
Sequences producing significant alignments: (Bits) Value
seq1170 203 4e-47
>seq1170
Length=97779
Score = 203 bits (224), Expect = 4e-47
Identities = 1107/1754 (63%), Gaps = 61/1754 (3%)
Strand=Plus/Minus
Query 113597 CGGAGGTAGTACATCCCCGTCTTGAGCCCCTGCTTCCAGGCATACATATGCATCGAGGAC 113656
|| ||||||||||| ||||||||||| || |||||||| || | ||||| ||
Sbjct 61032 CGCAGGTAGTACATGCCCGTCTTGAGACCAAGCTTCCAGCCAGCGAAGTGCATGCTGGTG 60973
Query 113657 AACTTGGAGAGTGTTGGACTTTCCATGAAGAGGTTCATACTTTGGGATTGATCGATGAAG 113716
| |||| | ||| || | |||| || ||| | ||||| || || ||||||
Sbjct 60972 ATCTTGCCCATTGTCGGGTCCTTCATGTGGATGTTGAGGGACTGGGACTGGTCAATGAAG 60913
Query 113717 CGTCCACGATCCGCCGCCATATCAATCACATCCTTCATCTTG---ATTTCCCACACAGTT 113773
|||||||| || ||||| | || || | | || | |||||||| || ||
Sbjct 60912 GCACCACGATCGGCAGCCATCTGAA---CAACGGTGCGCTGGGAGATTTCCCAGACGGTC 60856
Query 113774 CTGTAGAGGTTCTTAATATCATCTGGGATATCCACGATATTTTGGATGGAGCCACCCGCC 113833
|||| || ||| | || | ||||| | ||| || || | ||| ||| |
Sbjct 60855 TTGTACAGAGCCTTGACCTCGGCGGGGATGTTAGGGATGTTCTGAACGGA---ACCGTTC 60799
Query 113834 TTGACCATGAGA---TCCTTCATATCCTTTGACCAGAGACCAATCTTTTTGAGATCCTCC 113890
| | | |||| | | |||||| | | ||||| | || || | ||||||| |
Sbjct 60798 TCGGCGATGATACGGTTCTTCATGGCATCGGACCACAAGCCCATGTCGACAAGATCCTTC 60739
Query 113891 ACGAGATGCTTATTGACAACAACAAACTCACCCGCGAGGGTGCGTCTCAGATAGATATTG 113950
| || |||||||| ||||| || ||||| || | | | ||||| |||
Sbjct 60738 AGCAGCCAGGGGTTGACAACCTGGAACTCGCCGGCGAGAACACGGCGCTGGTAGATGTTG 60679
Query 113951 GTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCGGTGGAGGCTGTGGGC 114010
| ||||| ||||| |||||||| ||||| |||||||| |||| |||||||| || |||
Sbjct 60678 GAGGTGTAGGGCTCGAAGCACTCGTTGTTGCCCAAGATCTGGGAAGTGGAGGCAGTAGGC 60619
Query 114011 ATGGGTGCCATGAGAAGGCTGTTACGGAGACCCTTTTCCCTAATGCGTTCCTTGAGGGCG 114070
||||| || | || | ||||| || | ||| | ||| | || | ||||| || | |
Sbjct 60618 ATGGGAGCAACAAGCAAACTGTTGCGAACACCGTGCTCCTTGATTTGCTCCTTCAGAGAG 60559
Query 114071 TCCCAGTCGTAGTTGAGCTTTGTCTCCCCCTGCCACATATCAAACTGGAGGATACCTTGG 114130
|||||||| || | | || | | |||||| || |||| |||||||| |||
Sbjct 60558 TCCCAGTCCCAGAGGTCAGAGGGCTTGACATTCCACATGTCGTACTGAAGGATACCCTGG 60499
Query 114131 GAGGCTGGCGATCCCTCAAATGTCTCGTATGGGCCCTCAACCTCCGCCAATT---CGGAG 114187
||| || || ||||| | || ||| | ||||| || |||| || ||||
Sbjct 60498 GAGATAGGGGAGCCCTCGTACGTGGAGTAGGTACCCTCCTCCCTGGCCAGTTGAACGGAC 60439
Query 114188 CTCGCCTCGAGGGCTGCGTGATACATTGTCTCAAAAATGCGAGCATTCATTGCCTTGGCC 114247
| | | || || ||||| || || ||||||||||| ||| | | |||
Sbjct 60438 ATGGTC---AGAGCGGCGTGGTAGATGGTCTCAAAAATCTTCTTATTGAGATCGCGAGCC 60382
Query 114248 TCGTCGGAATCAAACGCGAGTCGGCACAAAATAAATACATCCGCGAGACCTTGGACACCG 114307
|| || || || | | ||| | || |||| || ||||| ||||||||
Sbjct 60381 TCAGGAGACTCGAAAGGCATGCGGAGGGCGAGGAAGGCATCAGCAAGACCCTGGACACCA 60322
Query 114308 AGGCCAATTGGGCGATGTCTCATATTAGACTTTCGAGCGGTCTCC---ACGGGATAAAAA 114364
|| || || ||||| || | ||| || || ||||| ||| ||||| ||
Sbjct 60321 AGACCGATGGGGCGGTGACGCATGTTGCTGTTGCGAGC---CTCAGGAACGGGGTAGTGG 60265
Query 114365 TTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATGAAGCTTT 114424
|| ||| || | | | || || || || |||| |||| || ||||||||
Sbjct 60264 TTGACATCAATGATCTTGTTCAGGTTGCGAACAACGACCTGAGTGACCTCGTGAAGCTTC 60205
Query 114425 TCGTAATCA-AAACTGCG--AGTCTCTTCATTGACATACTTAGGAAGGGCGATTGACGCC 114481
| | |||| |||| | | | | ||| || | |||| ||||| | || |||
Sbjct 60204 TGGAAATCGTAAACACCCTCATTGTAGTCAACGA---AGGTAGGCAGGGCAAGAGAGGCC 60148
Query 114482 AGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTACACAAATTT 114541
| || || |||| | |||||| | |||||| ||||| || || || | ||
Sbjct 60147 AAGTTGCAGACAGCGACCTCATCGGGGGCGCAGTACTCAATAATCTCAGTGCAGAGGTTG 60088
Query 114542 GAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCATCCTTGTAA 114601
|| || ||||| || | ||||||||| || ||| ||| ||||||||||||
Sbjct 60087 GAGCTGCGGATGGTTCCGAGGTTCTTTTGGTTGCTCTTGCGGTTCGCGGCATCCTTGTAA 60028
Query 114602 AGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCAGA-CATCGGC 114660
|||||| | || | || ||||| || || | || ||| || || | ||| | | || |
Sbjct 60027 AGCATGAAGGGGTTGCCGGTCTCAGTCTGAGCCTCGAGGATGGCGTACCAAAGCTTCTGG 59968
Query 114661 GGCTGGCACAGTGGCGTTGGCTCGCCCCT---CCTC---CTCGTACTTTGTGTAGAGGGC 114714
| || | ||| ||| || |||| |||| |||||||||| ||| | |||
Sbjct 59967 GCCTTG----ATGGTCTTG---CGACCCTTGCCCTCGCGCTCGTACTTTTCGTACAAGGC 59915
Query 114715 TTCAAACTCTTCACCCACGGCCTCTGAGAGCCCTGGTGCCTTATCTGGGCAGAAGAGAGA 114774
|||||||| || || | || | || || || || | ||||| | ||| |
Sbjct 59914 CTCAAACTCCTCGCCGTAGCAGTCAGCCAGGCCGGGGCACTCGTTGGGGCACATGAGGGT 59855
Query 114775 CCATTGACCACCCTCCTCAACACGCTTCATGAAGAGGTCTGGGATCCAGAGAGCTGAGAA 114834
||||| | || ||| || | ||||||||| || || ||||||||||| || |||
Sbjct 59854 CCATTCGGCGTTCTTCTCGACTCTCTTCATGAACAGATCGGGGATCCAGAGGGCGAGGAA 59795
Query 114835 GAGATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAAAGTCCAT 114894
|| || || || | || || | || || || ||||| |||| || || |
Sbjct 59794 AAGGTCACGGGCACGGACCTCCTCCTTGCCGTGGTTCTTGCGCAAGTCCATGAACTCGAA 59735
Query 114895 GATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTGACCCCTTACGACG------ACC 114948
|| ||| |||||||| || || ||||| | |||| | || | |||| ||
Sbjct 59734 GACATCGGCGTGCCAGGGCTCAAGGTAGATGGCGAAGGCACC---AGGACGCTTGTTGCC 59678
Query 114949 AGCCTGGTTTACATACCTCGCTGTGGCATTAAATACGCGAAGCATTGGAATGATACCATC 115008
| |||||| || || | || ||| || || || |||||||| ||||||| || |
Sbjct 59677 ACCCTGGTCGACGTAGCGAGCAGTGTTGTTGAAGACACGAAGCATGGGAATGACGCCGTT 59618
Query 115009 AGATTGGCCATTTGTCCCCCGAA--TACGAGACTTATTGGCTCTGACATCATGGATGTGC 115066
||| ||| || || || || || ||| | | |||| | || | || ||
Sbjct 59617 AGAGGTGCCGTTGGTGCCGGCAATGTAGGAGCC--AGTGGCACGGATACGGTGAGCGTTG 59560
Query 115067 ATACCAATACCCCCTGCCCACTTTGAGATTTGCGCGCACTCCGTGAGACTGCCGTAGATC 115126
| ||||| || || ||| ||| ||||| ||||| | |||| || |||||||
Sbjct 59559 AGGCCAATGCCACCAGCCATCTTGGAGATCATGGCGCAGGTCTTGAGGGTGTCGTAGATA 59500
Query 115127 CCGTCGATCGAGTCACCCTTATTTGCGATAAGGAAGCAGCTCGACATTTGTGGCCTTGGT 115186
|| || || ||||| |||| | ||| |||||||| |||| || | ||
Sbjct 59499 CCCTCAATGGAGTCTTCCTTCATGTCGACGAGGAAGCATGAAGACAGCTGGCACTGAGGG 59440
Query 115187 GTACCAGCGTTGAAGAGGGTTGGTGTCGCGTGGATGAACATACCTTG--GGACATCTTAT 115244
||||| || ||||| || || || | ||||| ||| | | |||| |||||| |
Sbjct 59439 GTACCGGCATTGAAAAGTGTGGGGGAGGCGTGTGTGA--AGAACTTGCTGGACATGAGGT 59382
Query 115245 CGTAGGTCTCCAAGACGGCGGGAATGTCTTCCCCGTGAATACCGATCGAGACCCGCATAA 115304
||||||||| | |||| || || || || ||||||| | ||| ||||| |
Sbjct 59381 TGTAGGTCTCGATGACGCGCTCAACATCGTCGCCCCAGATACCGACTGCGACACGCATGA 59322
Query 115305 ACATGTATTGGGGT 115318
||||| || |||
Sbjct 59321 TCATGTGCTGCGGT 59308
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 597340017672520
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |