Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Colletotrichum_20godetiae_20[genbank_20GCA_5F001663355.1_202016-06- 15] 1,819 sequences; 35,034,269 total letters Query= NC_012639.1 Length=141291 Score E Sequences producing significant alignments: (Bits) Value seq866 82.4 7e-11 >seq866 Length=7889 Score = 82.4 bits (90), Expect = 7e-11 Identities = 135/192 (70%), Gaps = 2/192 (1%) Strand=Plus/Minus Query 45138 TGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAATCGTCCAATTGT 45197 || ||||| || ||||| || || || || ||| || ||| ||| || | ||| Sbjct 2619 TGGAGCGTGGACTCCTTCTGAATGTTGTAGTCGGAGAGGGTGCGGCCATCCTCAAGTTGC 2560 Query 45198 TTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGAATTTTT 45257 || || || | ||||| || |||||||| || |||||||| || || || ||||| || Sbjct 2559 TTGCCAGCAAAGATCAAACGCTGCTGGTCAGGAGGAATGCCCTCCTTGTCCTGAATCTTG 2500 Query 45258 TGTTTGATCGCT-TCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTTGCCGGT 45316 |||| || | || | ||| || ||||||||||| || || || | || |||||||| Sbjct 2499 GACTTGA-CGTTGTCGATGGTATCAGAAGACTCGACCTCAAGGGTGATGGTCTTGCCGGT 2441 Query 45317 TAGAGTTTTTAC 45328 || || || || Sbjct 2440 GAGGGTCTTGAC 2429 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 451992922577240