Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Colletotrichum_20godetiae_20[genbank_20GCA_5F001663355.1_202016-06-
15] 1,819 sequences; 35,034,269 total letters
Query= NC_014637.1
Length=617453
Score E
Sequences producing significant alignments: (Bits) Value
seq866 84.2 9e-11
>seq866
Length=7889
Score = 84.2 bits (92), Expect = 9e-11
Identities = 138/199 (69%), Gaps = 0/199 (0%)
Strand=Plus/Plus
Query 391060 TCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCTGATAACATTG 391119
|||| || || || || || || || || || ||||| || || || ||||||| ||| |
Sbjct 2427 TCGTCAAGACCCTCACCGGCAAGACCATCACCCTTGAGGTCGAGTCTTCTGATACCATCG 2486
Query 391120 AAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAACAACGTTTAA 391179
| | || || ||||| || ||||| || ||||||||||| || || ||||| |
Sbjct 2487 ACAACGTCAAGTCCAAGATTCAGGACAAGGAGGGCATTCCTCCTGACCAGCAGCGTTTGA 2546
Query 391180 TTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAATATTGATAAGG 391239
| || | || || |||||||| ||||| | || | | || || || ||| | ||||
Sbjct 2547 TCTTTGCTGGCAAGCAACTTGAGGATGGCCGCACCCTCTCCGACTACAACATTCAGAAGG 2606
Query 391240 ATGCAACACTTCACTTAGT 391258
| | || || ||||| ||
Sbjct 2607 AGTCCACGCTCCACTTGGT 2625
Score = 84.2 bits (92), Expect = 9e-11
Identities = 133/191 (70%), Gaps = 0/191 (0%)
Strand=Plus/Plus
Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109
||| | || ||||| || || || ||||| || || || || || || |||||||| ||
Sbjct 2645 ATGCAGATCTTCGTGAAGACTCTTACTGGCAAGACAATCACGCTCGAGGTTGAATCTTCA 2704
Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169
|| | |||||| |||| || || ||||||||||| || || || || || ||
Sbjct 2705 GACACCATTGACAACGTTAAGTCGAAGATCCAAGATAAGGAGGGTATCCCCCCCGACCAG 2764
Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229
|| || || || ||| | || || || ||||| || || | || ||| |||| || ||
Sbjct 2765 CAGCGCTTGATCTTCGCCGGAAAGCAGCTTGAGGACGGTCGCACGTTGTCGGACTACAAC 2824
Query 391230 ATTGATAAGGA 391240
|| | |||||
Sbjct 2825 ATCCAGAAGGA 2835
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1975672354030452
| Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |