Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Colletotrichum_20godetiae_20[genbank_20GCA_5F001663355.1_202016-06-
15] 1,819 sequences; 35,034,269 total letters
Query= NC_014649.1
Length=1181549
Score E
Sequences producing significant alignments: (Bits) Value
seq48 93.3 3e-13
>seq48
Length=78858
Score = 93.3 bits (102), Expect = 3e-13
Identities = 101/134 (75%), Gaps = 0/134 (0%)
Strand=Plus/Plus
Query 668855 GGTAAAGAAGGTCGTATTAGAGGAAATTTGATGGGAAAACGTGTCGATATGTCTGCACGT 668914
|| || ||||||||| || | || |||||||||||||| ||||| || | || ||||||
Sbjct 50773 GGCAAGGAAGGTCGTCTTCGTGGCAATTTGATGGGAAAGCGTGTTGACTTCTCGGCACGT 50832
Query 668915 ACAGTTATTACTTCTGATCCCAATATTGCTCTCAATGAAGTTGGTGTTCCTCTTATTATT 668974
|| || ||||| |||| |||| | ||||| | || ||||||||||||| | |||
Sbjct 50833 ACTGTCATTACCGGTGATGCCAACCTGTCTCTCGACGAGGTTGGTGTTCCTCGAAGTATC 50892
Query 668975 GCTAAAAATCTTAC 668988
|| | || ||| ||
Sbjct 50893 GCAAGAACTCTCAC 50906
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 3780732135228214
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |