Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Colletotrichum_20godetiae_20[genbank_20GCA_5F001663355.1_202016-06- 15] 1,819 sequences; 35,034,269 total letters Query= NC_016072.1 Length=1259197 Score E Sequences producing significant alignments: (Bits) Value seq1295 93.3 3e-13 >seq1295 Length=19304 Score = 93.3 bits (102), Expect = 3e-13 Identities = 102/136 (75%), Gaps = 0/136 (0%) Strand=Plus/Minus Query 550401 CAGTAATAACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCTG 550460 |||| | ||||| || || || || || ||||| || ||||||||||| || || || | Sbjct 14482 CAGTCGTCACTGTCCCCGCCTACTTCAACGACTCCCAGCGTCAAGCTACCAAGGACGCAG 14423 Query 550461 GACGTATTGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTTG 550520 | | ||||| || || || || |||||||| ||||| || ||||| || ||||| ||| Sbjct 14422 GTCTCATTGCCGGCCTCAACGTCCTTCGTATCATCAACGAGCCTACCGCCGCTGCCATTG 14363 Query 550521 CATATGGACTTGATAA 550536 | || || ||||| || Sbjct 14362 CCTACGGTCTTGACAA 14347 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 4029199803076310