Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Colletotrichum_20godetiae_20[genbank_20GCA_5F001663355.1_202016-06-
15] 1,819 sequences; 35,034,269 total letters
Query= NC_016072.1
Length=1259197
Score E
Sequences producing significant alignments: (Bits) Value
seq1295 93.3 3e-13
>seq1295
Length=19304
Score = 93.3 bits (102), Expect = 3e-13
Identities = 102/136 (75%), Gaps = 0/136 (0%)
Strand=Plus/Minus
Query 550401 CAGTAATAACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCTG 550460
|||| | ||||| || || || || || ||||| || ||||||||||| || || || |
Sbjct 14482 CAGTCGTCACTGTCCCCGCCTACTTCAACGACTCCCAGCGTCAAGCTACCAAGGACGCAG 14423
Query 550461 GACGTATTGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTTG 550520
| | ||||| || || || || |||||||| ||||| || ||||| || ||||| |||
Sbjct 14422 GTCTCATTGCCGGCCTCAACGTCCTTCGTATCATCAACGAGCCTACCGCCGCTGCCATTG 14363
Query 550521 CATATGGACTTGATAA 550536
| || || ||||| ||
Sbjct 14362 CCTACGGTCTTGACAA 14347
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 4029199803076310
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |