Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Colletotrichum_20godetiae_20[genbank_20GCA_5F001663355.1_202016-06-
15] 1,819 sequences; 35,034,269 total letters
Query= NC_018504.1
Length=123876
Score E
Sequences producing significant alignments: (Bits) Value
seq866 98.7 8e-16
>seq866
Length=7889
Score = 98.7 bits (108), Expect = 8e-16
Identities = 137/192 (71%), Gaps = 0/192 (0%)
Strand=Plus/Minus
Query 101254 ACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGC 101313
||| | ||| || || || || || || || || || ||||| |||| || || | | |
Sbjct 2632 ACGGAGAACCAAGTGGAGCGTGGACTCCTTCTGAATGTTGTAGTCGGAGAGGGTGCGGCC 2573
Query 101314 ATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTT 101373
||| || | |||||| || ||||| ||||||||||| || || || |||||||| || ||
Sbjct 2572 ATCCTCAAGTTGCTTGCCAGCAAAGATCAAACGCTGCTGGTCAGGAGGAATGCCCTCCTT 2513
Query 101374 ATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGAC 101433
|| ||||| || || || | || | || ||||| | || || ||||| ||||
Sbjct 2512 GTCCTGAATCTTGGACTTGACGTTGTCGATGGTATCAGAAGACTCGACCTCAAGGGTGAT 2453
Query 101434 CGTTTTGCCGGT 101445
|| ||||||||
Sbjct 2452 GGTCTTGCCGGT 2441
Score = 93.3 bits (102), Expect = 3e-14
Identities = 132/186 (71%), Gaps = 0/186 (0%)
Strand=Plus/Minus
Query 101260 AACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTC 101319
||| || ||||||||||| || || || || ||||| |||| || || | | | || ||
Sbjct 2340 AACCAAGTGAAGGGTAGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCGTCCTC 2281
Query 101320 CAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTG 101379
| || || || || || || | |||||| |||||||| |||||||| || || |||||
Sbjct 2280 AAGCTGTTTGCCAGCGAAAATGAGACGCTGCTGATCGGGGGGAATGCCCTCCTTGTCTTG 2221
Query 101380 AATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTT 101439
||| || || || | || | || || || | || || || ||||||| || ||
Sbjct 2220 AATCTTGGACTTGACGTTGTCGATGGTATCGGATGACTCGACCTCGAGAGTGATGGTCTT 2161
Query 101440 GCCGGT 101445
||||||
Sbjct 2160 GCCGGT 2155
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 396269614879383
| Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |