Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Colletotrichum_20godetiae_20[genbank_20GCA_5F001663355.1_202016-06-
15] 1,819 sequences; 35,034,269 total letters
Query= NC_019491.1
Length=291144
Score E
Sequences producing significant alignments: (Bits) Value
seq1170 358 1e-93
>seq1170
Length=97779
Score = 358 bits (396), Expect = 1e-93
Identities = 1250/1924 (65%), Gaps = 74/1924 (4%)
Strand=Plus/Minus
Query 212553 ACCGTAAACTGTACTGGATCAGCAGCAGCCTTGGTGCGTAGATAGTACATGCCGGTCTTT 212612
|| || ||||| | ||| ||| ||| |||| || || || ||||||||||| |||||
Sbjct 61068 ACGGTGAACTGAATGGGAGCAGAAGCTGCCTGAGTACGCAGGTAGTACATGCCCGTCTTG 61009
Query 212613 AGGCC---CTTGCCCCAGCCGTGCATGTGCATTGCTG-TGAGTTTCTTCAGCTTAATATT 212668
|| || ||| |||||| | |||||| |||| ||| |||| | || |
Sbjct 61008 AGACCAAGCTT---CCAGCCAGCGAAGTGCAT-GCTGGTGA---TCTTGCCC---ATTGT 60959
Query 212669 CTGGTCATCCTCGTGGCCCAGATGTAGGTTCAGGGACTGACTCTGGTCTATGAATGGGGC 212728
| |||| | | |||| | ||| |||||||| |||||| ||||| | |
Sbjct 60958 CGGGTCCTTCATGTGG---------ATGTTGAGGGACTGGGACTGGTCAATGAAGGCACC 60908
Query 212729 CCTGTCAGCGGCCATGTCTATGATATCTCTCTGGGAGAGCTCCCACACGGTCTTGAAGAT 212788
| || || ||||| | | | | |||||||| ||||| ||||||||| | |
Sbjct 60907 ACGATCGGCAGCCATCTGAACAACGGTGCGCTGGGAGATTTCCCAGACGGTCTTGTACAG 60848
Query 212789 TTCTTTGAGGTCCTCTGGGAAGCCGGGGATGTTCTGCACAGACCCCCTGTGT---ATGGT 212845
| |||| || | |||| | ||||||||||| || || || | | ||| |
Sbjct 60847 AGCCTTGACCTCGGCGGGGATGTTAGGGATGTTCTGAACGGAACCGTTCTCGGCGATGAT 60788
Query 212846 CAGCTGCAGGCGCATGTCCTCGTTCCAGAGGCCCCTGGTCTCCAGGCACTTGACCAGGTG 212905
| | | |||| | ||| ||| | |||| || | || ||| | |||
Sbjct 60787 ACGGTTCTT---CATGGCATCGGACCACAAGCCCATGTCGACAAGATCCTTCAGCAGCCA 60731
Query 212906 AGGGTTGACTATCTGGAAGTCACCTGAGAGCACCCTCCTCTGGTAAAAGTTTGAAGTGTA 212965
|||||||| | |||||| || || | ||| || | | |||||| | ||| || |||||
Sbjct 60730 GGGGTTGACAACCTGGAACTCGCCGGCGAGAACACGGCGCTGGTAGATGTTGGAGGTGTA 60671
Query 212966 GGGCTCGATGCTCTCGTTGTTCCCCAGAATCTGTGCAGTGCTGGCTGTGGGCATGGGAGC 213025
|||||||| || ||||||||| |||| ||||| | |||| ||| || |||||||||||
Sbjct 60670 GGGCTCGAAGCACTCGTTGTTGCCCAAGATCTGGGAAGTGGAGGCAGTAGGCATGGGAGC 60611
Query 213026 CACCAGGAGACTGTTCCTCACTCCGTGCTCGCCGATGAGGCGCCGAAGCTCTGCCCAGTC 213085
|| || | |||||| | || |||||||| ||| | | || || | ||||
Sbjct 60610 AACAAGCAAACTGTTGCGAACACCGTGCTCCTTGATTTG-CTCCT----TCAGAG-AGTC 60557
Query 213086 CCATCTGCCAGACAGGTCCTCGTCCTTCACGTTCCACATGTCAAACTGCAAGATGCCTTT 213145
||| | ||||| |||| | ||| || ||||||||||| |||| | ||| || |
Sbjct 60556 CCAG-TCCCAGA--GGTCAGAGGGCTTGACATTCCACATGTCGTACTGAAGGATACCCTG 60500
Query 213146 GCTCACGGGGCTGCCCTGGTAAGAGGAGTAGGGGCCATGCTCCTTGGCCAGCTCGCAGGA 213205
| | ||| ||||| ||| | |||||||| || | |||| ||||||| | |||
Sbjct 60499 GGAGATAGGGGAGCCCTCGTACGTGGAGTAGGTACCCTCCTCCCTGGCCAGTTGAACGGA 60440
Query 213206 CGCCTGCAGGGCAGCGTAGTAGATGGTTTCAAATATCTCCCTGTTGAGCTTCTTGGCCTC 213265
| ||| || |||| ||||||||| ||||| |||| | | ||||| | |||||
Sbjct 60439 CATGGTCAGAGCGGCGTGGTAGATGGTCTCAAAAATCTTCTTATTGAGATCGCGAGCCTC 60380
Query 213266 TGGGGACGTGAAGGGCATCATCATGCGTTGGAACACATCAGCCAGCCCCTGGACCCCGAT 213325
|| ||| ||| ||||| | | |||| ||||||| || |||||||| || |
Sbjct 60379 AGGAGACTCGAAAGGCATGCGGAGGGCGAGGAAGGCATCAGCAAGACCCTGGACACCAAG 60320
Query 213326 GCCGATGGGTCTGTGTCTCAGGTTAGACTTG-GAGCACTCCTCCAAGGGGTAAAAGTTGC 213384
|||||||| | ||| | || ||| ||| |||| ||| | |||||| ||||
Sbjct 60319 ACCGATGGGGCGGTGACGCATGTTGCTGTTGCGAGC-CTCAGGAACGGGGTAGTGGTTGA 60261
Query 213385 AGTCGATGATCTTGTTGAGGTTGCGGGTGGCCACTTTGGTGACATGGGCCAGGTACTCGT 213444
|| ||||||||||| |||||||| | || | ||||| | | || | || |
Sbjct 60260 CATCAATGATCTTGTTCAGGTTGCGAACAACGACCTGAGTGACCTCGTGAAGCTTCTGGA 60201
Query 213445 GATTGAACACGTAGCCCCC--GTCCTGCACAAACTCAGGCAGGGCGATGCTGGCCAGGTT 213502
|| | | || | || | || | || || ||||||||| | ||||| |||
Sbjct 60200 AATCGTAAAC--ACCCTCATTGTAGTCAACGAAGGTAGGCAGGGCAAGAGAGGCCAAGTT 60143
Query 213503 GCAAACGGCCACCTCCTGAGAGTCTGTGTACTCCATGATCTCGGTGCACAGGTTGCTGCA 213562
||| || || ||||| | | | | |||||| || ||||| ||||| |||||| ||
Sbjct 60142 GCAGACAGCGACCTCATCGGGGGCGCAGTACTCAATAATCTCAGTGCAGAGGTTGGAGCT 60083
Query 213563 TCGGATGGTGCCCAGGTTCTGGTGGTTTGACTTTGCGTTGGCAGAATCCTTGTAGAGCAT 213622
|||||||| || ||||||| ||||| ||| ||| || | ||||||||| |||||
Sbjct 60082 GCGGATGGTTCCGAGGTTCTTTTGGTTGCTCTTGCGGTTCGCGGCATCCTTGTAAAGCAT 60023
Query 213623 GTAGGGGGACCCGGTCTCTAGCTGGGACACCAGTATCTGGCTCCAGAGGTACCTGGCCTT 213682
| ||||| |||||||| ||| | | | || || | ||| || | | ||||||
Sbjct 60022 GAAGGGGTTGCCGGTCTCAGTCTGAGCCTCGAGGATGGCGTACCAAAGCTTCTGGGCCTT 59963
Query 213683 GACCACCCGCCTGACAGCTCCGGGCGTAGC-CTCGTACTGTTCGTAGAGCTCGTTGAATT 213741
|| | || | | | | | | || |||||||| |||||| | | | || |
Sbjct 59962 GATG----GTCTTGCGACCCTTGCCCTCGCGCTCGTACTTTTCGTACAAGGCCTCAAACT 59907
Query 213742 CGTGGCCCCAG-ACCCTGTCCAGTCCCGGACAGGATGCGGGACACATGAGGCTCCAGTCC 213800
| | ||| || | | | |||| || || || ||| ||||||||| |||| ||
Sbjct 59906 CCTCGCCGTAGCAGTCAG-CCAGGCCGGGGCACTCGTTGGGGCACATGAGGGTCCATTCG 59848
Query 213801 CCGT-CATCTCTGACTCTCTGCATGAACAGGTCCGGGACCCACAGCGCGGTGAACAGGTC 213859
||| | |||| |||||||| ||||||||| || |||| ||| || ||| ||| |||||
Sbjct 59847 GCGTTCTTCTC-GACTCTCTTCATGAACAGATCGGGGATCCAGAGGGCGAGGAAAAGGTC 59789
Query 213860 CCTGGTCCTCCTCTCGTCCACTCCAGAGTTTTTGCGCAGATCTAGAAAGTCAAAGATGTC 213919
| || | ||| ||| || ||| ||||||| || | || || |||| ||
Sbjct 59788 ACGGGCACGGACCTCCTCCTTGCCGTGGTTCTTGCGCAAGTCCATGAACTCGAAGACATC 59729
Query 213920 CGCGTGCCACGGCTCCATGTAGATGGCAAAGGCGCCCGGCCTCTTG---CCGCCCTGGTC 213976
|||||||| ||||| | ||||||||| ||||| || || | |||| || ||||||||
Sbjct 59728 GGCGTGCCAGGGCTCAAGGTAGATGGCGAAGGCACCAGGACGCTTGTTGCCACCCTGGTC 59669
Query 213977 CACCAGCCTGGCCACCA----TGTTGAAGATGCGCAGGACGGGTACCAGCCCGTTGGACT 214032
|| | || | || ||||||||| || || | ||| | | ||||| ||
Sbjct 59668 GACG----TAGCGAGCAGTGTTGTTGAAGACACGAAGCATGGGAATGACGCCGTTAGAGG 59613
Query 214033 GTCCGTTGGTTCCCGCTATATACGAGCCGGAGGCCCTCAG--GTTGCTCATGGAGAGCCC 214090
|||||||| || || || || ||||| | ||| | | | || | | ||| ||
Sbjct 59612 TGCCGTTGGTGCCGGCAATGTAGGAGCCAGTGGCACGGATACGGTGAGCGTTGAGG--CC 59555
Query 214091 TATGCCACCGGCGTACTTGGAGATCATGGCGCAGCGCCTCACAGTCTCCATGATGCCGGC 214150
|||||||| || ||||||||||||||||||| | | | || || ||| || |
Sbjct 59554 AATGCCACCAGCCATCTTGGAGATCATGGCGCAGGTCTTGAGGGTGTCGTAGATACCCTC 59495
Query 214151 CATGCTGTCATCTGTGAGGTTCAGCAAGAAGCAGCTCGAGAGCTGGGGCCTGGACGAGCC 214210
||| ||| || | | || | | |||||| || |||||| | | | ||
Sbjct 59494 AATGGAGTCTTCCTTCATGTCGACGAGGAAGCATGAAGACAGCTGGCACTGAGGGGTACC 59435
Query 214211 AGAGTTGAAAAGCGTGGGGCTGGCATGGATCATAAACTTGTTAGAGAGGAGCCTGTAGGT 214270
| |||||||| |||||| ||| || | | |||||| | || | ||| |||||||
Sbjct 59434 GGCATTGAAAAGTGTGGGGGAGGCGTGTGTGAAGAACTTGCTGGACATGAGGTTGTAGGT 59375
Query 214271 CTCCAGGACTGAGGGGATGTCGTGCTTGTGGATCTGTAGAGCGCACCTCATCAGCATGTG 214330
||| | ||| | |||| ||| | ||| | ||| | ||||||
Sbjct 59374 CTCGATGACGCGCTCAACATCGTCGCCCCAGATACCGACTGCGACACGCATGATCATGTG 59315
Query 214331 CTGGGGCCTCT---CTATGGGTCCTTTGGGGCCCTTGAGCAGGTAGGAGCGCTCCAGAGT 214387
||| || |||| | || || | | | |||||||||||| || | |||||||||
Sbjct 59314 CTGCGGTCTCTCGGCAATCTTGCCGTCGAG---CTTGAGCAGGTATGATCTCTCCAGAGT 59258
Query 214388 CTTGAACCCAAAGTAGGAGTAGGTATGATCGTTCCCGTGTATGAGGGCAGCGTCCAGCTC 214447
|||||| || ||||| |||| | ||| ||| | || ||||| ||| |||||
Sbjct 59257 CTTGAAGCCGAAGTATTGGTAGTTGAAGTCGCGGTCGTAGACGATGGCAGAGTCTAGCTC 59198
Query 214448 TTCC 214451
|||
Sbjct 59197 CTCC 59194
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 931511619272960
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |