Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Colletotrichum_20godetiae_20[genbank_20GCA_5F001663355.1_202016-06- 15] 1,819 sequences; 35,034,269 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq1170 358 1e-93 >seq1170 Length=97779 Score = 358 bits (396), Expect = 1e-93 Identities = 1250/1924 (65%), Gaps = 74/1924 (4%) Strand=Plus/Minus Query 212553 ACCGTAAACTGTACTGGATCAGCAGCAGCCTTGGTGCGTAGATAGTACATGCCGGTCTTT 212612 || || ||||| | ||| ||| ||| |||| || || || ||||||||||| ||||| Sbjct 61068 ACGGTGAACTGAATGGGAGCAGAAGCTGCCTGAGTACGCAGGTAGTACATGCCCGTCTTG 61009 Query 212613 AGGCC---CTTGCCCCAGCCGTGCATGTGCATTGCTG-TGAGTTTCTTCAGCTTAATATT 212668 || || ||| |||||| | |||||| |||| ||| |||| | || | Sbjct 61008 AGACCAAGCTT---CCAGCCAGCGAAGTGCAT-GCTGGTGA---TCTTGCCC---ATTGT 60959 Query 212669 CTGGTCATCCTCGTGGCCCAGATGTAGGTTCAGGGACTGACTCTGGTCTATGAATGGGGC 212728 | |||| | | |||| | ||| |||||||| |||||| ||||| | | Sbjct 60958 CGGGTCCTTCATGTGG---------ATGTTGAGGGACTGGGACTGGTCAATGAAGGCACC 60908 Query 212729 CCTGTCAGCGGCCATGTCTATGATATCTCTCTGGGAGAGCTCCCACACGGTCTTGAAGAT 212788 | || || ||||| | | | | |||||||| ||||| ||||||||| | | Sbjct 60907 ACGATCGGCAGCCATCTGAACAACGGTGCGCTGGGAGATTTCCCAGACGGTCTTGTACAG 60848 Query 212789 TTCTTTGAGGTCCTCTGGGAAGCCGGGGATGTTCTGCACAGACCCCCTGTGT---ATGGT 212845 | |||| || | |||| | ||||||||||| || || || | | ||| | Sbjct 60847 AGCCTTGACCTCGGCGGGGATGTTAGGGATGTTCTGAACGGAACCGTTCTCGGCGATGAT 60788 Query 212846 CAGCTGCAGGCGCATGTCCTCGTTCCAGAGGCCCCTGGTCTCCAGGCACTTGACCAGGTG 212905 | | | |||| | ||| ||| | |||| || | || ||| | ||| Sbjct 60787 ACGGTTCTT---CATGGCATCGGACCACAAGCCCATGTCGACAAGATCCTTCAGCAGCCA 60731 Query 212906 AGGGTTGACTATCTGGAAGTCACCTGAGAGCACCCTCCTCTGGTAAAAGTTTGAAGTGTA 212965 |||||||| | |||||| || || | ||| || | | |||||| | ||| || ||||| Sbjct 60730 GGGGTTGACAACCTGGAACTCGCCGGCGAGAACACGGCGCTGGTAGATGTTGGAGGTGTA 60671 Query 212966 GGGCTCGATGCTCTCGTTGTTCCCCAGAATCTGTGCAGTGCTGGCTGTGGGCATGGGAGC 213025 |||||||| || ||||||||| |||| ||||| | |||| ||| || ||||||||||| Sbjct 60670 GGGCTCGAAGCACTCGTTGTTGCCCAAGATCTGGGAAGTGGAGGCAGTAGGCATGGGAGC 60611 Query 213026 CACCAGGAGACTGTTCCTCACTCCGTGCTCGCCGATGAGGCGCCGAAGCTCTGCCCAGTC 213085 || || | |||||| | || |||||||| ||| | | || || | |||| Sbjct 60610 AACAAGCAAACTGTTGCGAACACCGTGCTCCTTGATTTG-CTCCT----TCAGAG-AGTC 60557 Query 213086 CCATCTGCCAGACAGGTCCTCGTCCTTCACGTTCCACATGTCAAACTGCAAGATGCCTTT 213145 ||| | ||||| |||| | ||| || ||||||||||| |||| | ||| || | Sbjct 60556 CCAG-TCCCAGA--GGTCAGAGGGCTTGACATTCCACATGTCGTACTGAAGGATACCCTG 60500 Query 213146 GCTCACGGGGCTGCCCTGGTAAGAGGAGTAGGGGCCATGCTCCTTGGCCAGCTCGCAGGA 213205 | | ||| ||||| ||| | |||||||| || | |||| ||||||| | ||| Sbjct 60499 GGAGATAGGGGAGCCCTCGTACGTGGAGTAGGTACCCTCCTCCCTGGCCAGTTGAACGGA 60440 Query 213206 CGCCTGCAGGGCAGCGTAGTAGATGGTTTCAAATATCTCCCTGTTGAGCTTCTTGGCCTC 213265 | ||| || |||| ||||||||| ||||| |||| | | ||||| | ||||| Sbjct 60439 CATGGTCAGAGCGGCGTGGTAGATGGTCTCAAAAATCTTCTTATTGAGATCGCGAGCCTC 60380 Query 213266 TGGGGACGTGAAGGGCATCATCATGCGTTGGAACACATCAGCCAGCCCCTGGACCCCGAT 213325 || ||| ||| ||||| | | |||| ||||||| || |||||||| || | Sbjct 60379 AGGAGACTCGAAAGGCATGCGGAGGGCGAGGAAGGCATCAGCAAGACCCTGGACACCAAG 60320 Query 213326 GCCGATGGGTCTGTGTCTCAGGTTAGACTTG-GAGCACTCCTCCAAGGGGTAAAAGTTGC 213384 |||||||| | ||| | || ||| ||| |||| ||| | |||||| |||| Sbjct 60319 ACCGATGGGGCGGTGACGCATGTTGCTGTTGCGAGC-CTCAGGAACGGGGTAGTGGTTGA 60261 Query 213385 AGTCGATGATCTTGTTGAGGTTGCGGGTGGCCACTTTGGTGACATGGGCCAGGTACTCGT 213444 || ||||||||||| |||||||| | || | ||||| | | || | || | Sbjct 60260 CATCAATGATCTTGTTCAGGTTGCGAACAACGACCTGAGTGACCTCGTGAAGCTTCTGGA 60201 Query 213445 GATTGAACACGTAGCCCCC--GTCCTGCACAAACTCAGGCAGGGCGATGCTGGCCAGGTT 213502 || | | || | || | || | || || ||||||||| | ||||| ||| Sbjct 60200 AATCGTAAAC--ACCCTCATTGTAGTCAACGAAGGTAGGCAGGGCAAGAGAGGCCAAGTT 60143 Query 213503 GCAAACGGCCACCTCCTGAGAGTCTGTGTACTCCATGATCTCGGTGCACAGGTTGCTGCA 213562 ||| || || ||||| | | | | |||||| || ||||| ||||| |||||| || Sbjct 60142 GCAGACAGCGACCTCATCGGGGGCGCAGTACTCAATAATCTCAGTGCAGAGGTTGGAGCT 60083 Query 213563 TCGGATGGTGCCCAGGTTCTGGTGGTTTGACTTTGCGTTGGCAGAATCCTTGTAGAGCAT 213622 |||||||| || ||||||| ||||| ||| ||| || | ||||||||| ||||| Sbjct 60082 GCGGATGGTTCCGAGGTTCTTTTGGTTGCTCTTGCGGTTCGCGGCATCCTTGTAAAGCAT 60023 Query 213623 GTAGGGGGACCCGGTCTCTAGCTGGGACACCAGTATCTGGCTCCAGAGGTACCTGGCCTT 213682 | ||||| |||||||| ||| | | | || || | ||| || | | |||||| Sbjct 60022 GAAGGGGTTGCCGGTCTCAGTCTGAGCCTCGAGGATGGCGTACCAAAGCTTCTGGGCCTT 59963 Query 213683 GACCACCCGCCTGACAGCTCCGGGCGTAGC-CTCGTACTGTTCGTAGAGCTCGTTGAATT 213741 || | || | | | | | | || |||||||| |||||| | | | || | Sbjct 59962 GATG----GTCTTGCGACCCTTGCCCTCGCGCTCGTACTTTTCGTACAAGGCCTCAAACT 59907 Query 213742 CGTGGCCCCAG-ACCCTGTCCAGTCCCGGACAGGATGCGGGACACATGAGGCTCCAGTCC 213800 | | ||| || | | | |||| || || || ||| ||||||||| |||| || Sbjct 59906 CCTCGCCGTAGCAGTCAG-CCAGGCCGGGGCACTCGTTGGGGCACATGAGGGTCCATTCG 59848 Query 213801 CCGT-CATCTCTGACTCTCTGCATGAACAGGTCCGGGACCCACAGCGCGGTGAACAGGTC 213859 ||| | |||| |||||||| ||||||||| || |||| ||| || ||| ||| ||||| Sbjct 59847 GCGTTCTTCTC-GACTCTCTTCATGAACAGATCGGGGATCCAGAGGGCGAGGAAAAGGTC 59789 Query 213860 CCTGGTCCTCCTCTCGTCCACTCCAGAGTTTTTGCGCAGATCTAGAAAGTCAAAGATGTC 213919 | || | ||| ||| || ||| ||||||| || | || || |||| || Sbjct 59788 ACGGGCACGGACCTCCTCCTTGCCGTGGTTCTTGCGCAAGTCCATGAACTCGAAGACATC 59729 Query 213920 CGCGTGCCACGGCTCCATGTAGATGGCAAAGGCGCCCGGCCTCTTG---CCGCCCTGGTC 213976 |||||||| ||||| | ||||||||| ||||| || || | |||| || |||||||| Sbjct 59728 GGCGTGCCAGGGCTCAAGGTAGATGGCGAAGGCACCAGGACGCTTGTTGCCACCCTGGTC 59669 Query 213977 CACCAGCCTGGCCACCA----TGTTGAAGATGCGCAGGACGGGTACCAGCCCGTTGGACT 214032 || | || | || ||||||||| || || | ||| | | ||||| || Sbjct 59668 GACG----TAGCGAGCAGTGTTGTTGAAGACACGAAGCATGGGAATGACGCCGTTAGAGG 59613 Query 214033 GTCCGTTGGTTCCCGCTATATACGAGCCGGAGGCCCTCAG--GTTGCTCATGGAGAGCCC 214090 |||||||| || || || || ||||| | ||| | | | || | | ||| || Sbjct 59612 TGCCGTTGGTGCCGGCAATGTAGGAGCCAGTGGCACGGATACGGTGAGCGTTGAGG--CC 59555 Query 214091 TATGCCACCGGCGTACTTGGAGATCATGGCGCAGCGCCTCACAGTCTCCATGATGCCGGC 214150 |||||||| || ||||||||||||||||||| | | | || || ||| || | Sbjct 59554 AATGCCACCAGCCATCTTGGAGATCATGGCGCAGGTCTTGAGGGTGTCGTAGATACCCTC 59495 Query 214151 CATGCTGTCATCTGTGAGGTTCAGCAAGAAGCAGCTCGAGAGCTGGGGCCTGGACGAGCC 214210 ||| ||| || | | || | | |||||| || |||||| | | | || Sbjct 59494 AATGGAGTCTTCCTTCATGTCGACGAGGAAGCATGAAGACAGCTGGCACTGAGGGGTACC 59435 Query 214211 AGAGTTGAAAAGCGTGGGGCTGGCATGGATCATAAACTTGTTAGAGAGGAGCCTGTAGGT 214270 | |||||||| |||||| ||| || | | |||||| | || | ||| ||||||| Sbjct 59434 GGCATTGAAAAGTGTGGGGGAGGCGTGTGTGAAGAACTTGCTGGACATGAGGTTGTAGGT 59375 Query 214271 CTCCAGGACTGAGGGGATGTCGTGCTTGTGGATCTGTAGAGCGCACCTCATCAGCATGTG 214330 ||| | ||| | |||| ||| | ||| | ||| | |||||| Sbjct 59374 CTCGATGACGCGCTCAACATCGTCGCCCCAGATACCGACTGCGACACGCATGATCATGTG 59315 Query 214331 CTGGGGCCTCT---CTATGGGTCCTTTGGGGCCCTTGAGCAGGTAGGAGCGCTCCAGAGT 214387 ||| || |||| | || || | | | |||||||||||| || | ||||||||| Sbjct 59314 CTGCGGTCTCTCGGCAATCTTGCCGTCGAG---CTTGAGCAGGTATGATCTCTCCAGAGT 59258 Query 214388 CTTGAACCCAAAGTAGGAGTAGGTATGATCGTTCCCGTGTATGAGGGCAGCGTCCAGCTC 214447 |||||| || ||||| |||| | ||| ||| | || ||||| ||| ||||| Sbjct 59257 CTTGAAGCCGAAGTATTGGTAGTTGAAGTCGCGGTCGTAGACGATGGCAGAGTCTAGCTC 59198 Query 214448 TTCC 214451 ||| Sbjct 59197 CTCC 59194 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 931511619272960