Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Colletotrichum_20godetiae_20[genbank_20GCA_5F001663355.1_202016-06-
15] 1,819 sequences; 35,034,269 total letters
Query= NC_020104.1
Length=1021348
Score E
Sequences producing significant alignments: (Bits) Value
seq866 96.9 2e-14
>seq866
Length=7889
Score = 96.9 bits (106), Expect = 2e-14
Identities = 111/147 (76%), Gaps = 2/147 (1%)
Strand=Plus/Minus
Query 480617 ATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCTTCCTT 480676
||| ||||||||||| |||||||| || | ||| || || ||||||||||| || |||||
Sbjct 2572 ATCCTCAAGTTGCTTGCCAGCAAAGATCAAACGCTGCTGGTCAGGAGGAATGCCCTCCTT 2513
Query 480677 GTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAG-TGTGTGAAGTTTCAAGGGTAA 480735
||| |||||||| ||||| || || ||||||| | | | |||||||| |
Sbjct 2512 GTCCTGAATCTTGGACTTGACGTTGTCGATGGTATCAGAAGACTCGA-CCTCAAGGGTGA 2454
Query 480736 TAGTTTTACCGGTGAGAGTCTTAACGA 480762
| || || |||||||| ||||| ||||
Sbjct 2453 TGGTCTTGCCGGTGAGGGTCTTGACGA 2427
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 3268101174264212
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |