Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Colletotrichum_20godetiae_20[genbank_20GCA_5F001663355.1_202016-06- 15] 1,819 sequences; 35,034,269 total letters Query= NC_020104.1 Length=1021348 Score E Sequences producing significant alignments: (Bits) Value seq866 96.9 2e-14 >seq866 Length=7889 Score = 96.9 bits (106), Expect = 2e-14 Identities = 111/147 (76%), Gaps = 2/147 (1%) Strand=Plus/Minus Query 480617 ATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCTTCCTT 480676 ||| ||||||||||| |||||||| || | ||| || || ||||||||||| || ||||| Sbjct 2572 ATCCTCAAGTTGCTTGCCAGCAAAGATCAAACGCTGCTGGTCAGGAGGAATGCCCTCCTT 2513 Query 480677 GTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAG-TGTGTGAAGTTTCAAGGGTAA 480735 ||| |||||||| ||||| || || ||||||| | | | |||||||| | Sbjct 2512 GTCCTGAATCTTGGACTTGACGTTGTCGATGGTATCAGAAGACTCGA-CCTCAAGGGTGA 2454 Query 480736 TAGTTTTACCGGTGAGAGTCTTAACGA 480762 | || || |||||||| ||||| |||| Sbjct 2453 TGGTCTTGCCGGTGAGGGTCTTGACGA 2427 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3268101174264212